Evidence map›Paper›PMID 31772165›Full record

ArticleNature communications2019

An MPER antibody neutralizes HIV-1 using germline features shared among donors.

Lei Zhang, Adriana Irimia, Lingling He, Elise Landais, Kimmo Rantalainen, Daniel P Leaman, Thomas Vollbrecht, Armando Stano, Daniel I Sands, Arthur S Kim and 8 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 58 citations in OpenAlex.

  1. Structural basis of membrane engagement and polyreactivity control in HIV-1 MPER broadly neutralizing antibodies.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 10 institutions in 11 countries.

Lei ZhangDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Adriana IrimiaDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Lingling HeDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Elise LandaisDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Kimmo RantalainenDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Daniel P LeamanDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Thomas VollbrechtDepartment of Medicine, University of California, San Diego, California, 92093, USA.ORCID http://orcid.org/0000-0003-1151-8844
Armando StanoDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Daniel I SandsDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA.ORCID http://orcid.org/0000-0001-6880-7036
Arthur S KimDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA.ORCID http://orcid.org/0000-0003-4101-6642
IAVI Protocol G Investigators
Pascal PoignardDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA.
Dennis R BurtonDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA.ORCID http://orcid.org/0000-0001-6711-9864
Ben MurrellDepartment of Medicine, University of California, San Diego, California, 92093, USA.
Andrew B WardDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, 92037, USA.ORCID http://orcid.org/0000-0001-7153-3769
Jiang ZhuDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA. jiang@scripps.edu.
Ian A WilsonDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, 92037, USA. wilson@scripps.edu.ORCID http://orcid.org/0000-0002-6469-2419
Michael B ZwickDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, California, 92037, USA. zwick@scripps.edu.
Scripps Research Institute · USEmory University · USDesmond Tutu HIV Foundation · ZAEmory and Henry College · USSt Stephen’s AIDS Trust · GBUganda Virus Research Institute · UGUniversity of Nairobi · KEInternational AIDS Vaccine Initiative · USMahidol University · THUniversity of California San Diego · US

Funding

Identification of neutralizing epitopes on SARS-CoV-2 spike for design of vaccines and small-molecule antiviralsUM1AI144462 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BURTON, DENNIS R. · 2019 to 2025
$201.6M
Support Component D/Vaccine Discovery, Concept to ClinicUM1AI100663 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI BAROUCH, DAN H. · 2012 to 2018
$131.5M
UC San Diego Clinical and Translational Research InstituteUL1TR001442 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIRESTEIN, GARY S, HOGARTH, MICHAEL · 2015 to 2024
$88.3M
VirologyP30AI036214 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI David Mitchell Smith · 1994 to 2026
$78.4M
X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Pushing the envelope: Optimizing vaccine display of flexibly linked HIV Env trimer immunogensP01AI124337 · NIAID · INTERNATIONAL AIDS VACCINE INITIATIVE · PI ZHU, JIANG · 2016 to 2020
$12.2M
Uncleaved prefusion-optimized trimers on nanoparticles as HIV vaccinesR01AI140844 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ZHU, JIANG · 2019 to 2023
$4.9M
HIV-1 vaccine design emphasizing bnAb targets on membrane Env liposomesR01AI143563 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ZWICK, MICHAEL B · 2019 to 2023
$4.0M
Rational design and B cell responses of HIV epitope vaccinesR01AI129698 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ZHU, JIANG · 2017 to 2021
$3.2M
Eliciting antibodies to probe native trimeric gp41 for HIV vaccine designR01AI114401 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ZWICK, MICHAEL B · 2014 to 2018
$2.9M
HIV-1 vaccine design emphasizing bnAb targets on membrane Env liposomesR56AI143563 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI ZWICK, MICHAEL B · 2019 to 2019
$292k
NCATS NIH HHS UL1 TR001442NIAID NIH HHS P01 AI124337NIAID NIH HHS P30 AI036214NIAID NIH HHS R01 AI114401NIAID NIH HHS R01 AI129698NIAID NIH HHS R01 AI140844NIAID NIH HHS R01 AI143563NIAID NIH HHS R56 AI143563NIAID NIH HHS UM1 AI100663NIAID NIH HHS UM1 AI144462NIGMS NIH HHS P41 GM103393
6 · The paper itself

Abstract

The membrane-proximal external region (MPER) of HIV-1 envelope glycoprotein (Env) can be targeted by neutralizing antibodies of exceptional breadth. MPER antibodies usually have long, hydrophobic CDRH3s, lack activity as inferred germline precursors, are often from the minor IgG3 subclass, and some are polyreactive, such as 4E10. Here we describe an MPER broadly neutralizing antibody from the major IgG1 subclass, PGZL1, which shares germline V/D-region genes with 4E10, has a shorter CDRH3, and is less polyreactive. A recombinant sublineage variant pan-neutralizes a 130-isolate panel at 1.4 μg/ml (IC

Indexed as

Antibodies, MonoclonalAntibodies, NeutralizingCell MembraneCryoelectron MicroscopyCrystallography, X-RayDrug Resistance, ViralEpitopesHIV-1HIV Envelope Protein gp41HumansHydrophobic and Hydrophilic InteractionsImmunoglobulin Fab FragmentsImmunoglobulin GProtein ConformationAntibodies, MonoclonalAntibodies, NeutralizingEpitopesHIV Envelope Protein gp41Immunoglobulin Fab FragmentsImmunoglobulin G

Identifiers

PMID31772165
PMCPMC6879610
OpenAlexW2990107335

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.