Evidence map›Paper›PMID 31772018›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain.

Devon S Svoboda, M Inmaculada Barrasa, Jian Shu, Rosalie Rietjens, Shupei Zhang, Maya Mitalipova, Peter Berube, Dongdong Fu, Leonard D Shultz, George W Bell and 1 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed, 1 pooled it
12.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed, 1 synthesis or guideline pooled it, 220 citations in OpenAlex.

  1. Pooled it
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  5. IL-9R/Arg1 pathway promotes polyamine metabolism in human airway macrophages.The Journal of allergy and clinical immunology · 2026
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61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Devon S SvobodaWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
M Inmaculada BarrasaWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
Jian ShuWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
Rosalie RietjensWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
Shupei ZhangWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
Maya MitalipovaWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
Peter BerubeBroad Institute of MIT and Harvard, Cambridge, MA 02142.
Dongdong FuWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
Leonard D ShultzThe Jackson Laboratory Cancer Center, The Jackson Laboratory, Bar Harbor, ME 04609.
George W BellWhitehead Institute for Biomedical Research, Cambridge, MA 02142.
Rudolf JaenischWhitehead Institute for Biomedical Research, Cambridge, MA 02142; jaenisch@wi.mit.edu.
Whitehead Institute for Biomedical Research · USBroad Institute · USMassachusetts Institute of Technology · USThe JAX Cancer Center

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI Anna Karolina Palucka · 1985 to 2026
$61.9M
GENOMIC IMPRINTING AND THE CLONING OF MICER37CA084198 · NCI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF · 2000 to 2008
$9.2M
Virology Core: MIT Center for Human Tissue Models for Infectious Diseases (MIT.HTMID)U19AI131135 · NIAID · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GEHRKE, LEE · 2017 to 2021
$8.7M
Epigenomic, transcriptional and cellular dissection of Alzheimer's variantsR01AG058002 · NIA · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HYMAN, BRADLEY T., JAENISCH, RUDOLF · 2017 to 2021
$7.9M
Transcriptional condensates, epigenetic editing and Rett SyndromeR01MH104610 · NIMH · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI JAENISCH, RUDOLF, YOUNG, RICHARD · 2014 to 2023
$7.4M
Live imaging of SARS-CoV-2 infection in novel humanized miceR24OD026440 · OD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI BREHM, MICHAEL ALLEN, EMERSON, CHARLES P. · 2019 to 2022
$4.2M
Dissecting and reconstructing the molecular roadmaps of cellular reprogramming to iPSCs in single-cell resolutionK99HD096049 · NICHD · BROAD INSTITUTE, INC. · PI SHU, JIAN · 2018 to 2019
$265k
NCI NIH HHS P30 CA034196NCI NIH HHS R37 CA084198NIAID NIH HHS U19 AI131135NIA NIH HHS R01 AG058002NICHD NIH HHS K99 HD096049NIH HHS R24 OD026440NIMH NIH HHS R01 MH104610
6 · The paper itself

Abstract

Microglia are essential for maintenance of normal brain function, with dysregulation contributing to numerous neurological diseases. Protocols have been developed to derive microglia-like cells from human induced pluripotent stem cells (hiPSCs). However, primary microglia display major differences in morphology and gene expression when grown in culture, including down-regulation of signature microglial genes. Thus, in vitro differentiated microglia may not accurately represent resting primary microglia. To address this issue, we transplanted microglial precursors derived in vitro from hiPSCs into neonatal mouse brains and found that the cells acquired characteristic microglial morphology and gene expression signatures that closely resembled primary human microglia. Single-cell RNA-sequencing analysis of transplanted microglia showed similar cellular heterogeneity as primary human cells. Thus, hiPSCs-derived microglia transplanted into the neonatal mouse brain assume a phenotype and gene expression signature resembling that of resting microglia residing in the human brain, making chimeras a superior tool to study microglia in human disease.

Indexed as

AnimalsBrainGene ExpressionHumansInduced Pluripotent Stem CellsMiceMicrogliaPhenotypechimeraCSF1microgliaP2RY12RNA-seq

Identifiers

PMID31772018
PMCPMC6911218
OpenAlexW2991406246

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.