Evidence map›Paper›PMID 31769916›Full record

ArticleThe FEBS journal2020

A GM1b/asialo-GM1 oligosaccharide-binding R-type lectin from purplish bifurcate mussels Mytilisepta virgata and its effect on MAP kinases.

Yuki Fujii, Marco Gerdol, Sarkar M A Kawsar, Imtiaj Hasan, Francesca Spazzali, Tatsusada Yoshida, Yukiko Ogawa, Sultana Rajia, Kenichi Kamata, Yasuhiro Koide and 6 more

Open access · hybridAbstract read
In one paragraph

Article in The FEBS journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 3 countries.

Yuki FujiiGraduate School of Pharmaceutical Sciences, Nagasaki International University, Sasebo, Japan.ORCID 0000-0001-6408-9620
Marco GerdolDepartment of Life Sciences, University of Trieste, Italy.ORCID 0000-0001-6411-0813
Sarkar M A KawsarDepartment of Chemistry, Faculty of Science, University of Chittagong, Bangladesh.ORCID 0000-0001-7964-9117
Imtiaj HasanSchool of Sciences, Yokohama City University, Japan.ORCID 0000-0002-4715-9022
Francesca SpazzaliDepartment of Life Sciences, University of Trieste, Italy.
Tatsusada YoshidaGraduate School of Pharmaceutical Sciences, Nagasaki International University, Sasebo, Japan.ORCID 0000-0002-7136-6152
Yukiko OgawaGraduate School of Pharmaceutical Sciences, Nagasaki International University, Sasebo, Japan.ORCID 0000-0003-1487-8079
Sultana RajiaSchool of Sciences, Yokohama City University, Japan.ORCID 0000-0003-2239-9625
Kenichi KamataGraduate School of Medical Life Science, Yokohama City University, Japan.ORCID 0000-0003-4344-8473
Yasuhiro KoideSchool of Sciences, Yokohama City University, Japan.ORCID 0000-0002-4043-9160
Shigeki SugawaraInstitute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Japan.ORCID 0000-0001-8806-5973
Masahiro HosonoInstitute of Molecular Biomembrane and Glycobiology, Tohoku Medical and Pharmaceutical University, Sendai, Japan.ORCID 0000-0003-0663-5560
Jeremy R H TameGraduate School of Medical Life Science, Yokohama City University, Japan.ORCID 0000-0002-9341-7280
Hideaki FujitaGraduate School of Pharmaceutical Sciences, Nagasaki International University, Sasebo, Japan.ORCID 0000-0002-4105-4430
Alberto PallaviciniDepartment of Life Sciences, University of Trieste, Italy.ORCID 0000-0001-7174-4603
Yasuhiro OzekiSchool of Sciences, Yokohama City University, Japan.ORCID 0000-0002-2782-6158
Nagasaki International University · JPUniversity of Trieste · ITYokohama City University · JPTohoku Medical and Pharmaceutical University · JPYokohama City University Medical Center · JPUniversity of Chittagong · BDVarendra University · BD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A 15-kDa lectin, termed SeviL, was isolated from Mytilisepta virgata (purplish bifurcate mussel). SeviL forms a noncovalent dimer that binds strongly to ganglio-series GM1b oligosaccharide (Neu5Acɑ2-3Galβ1-3GalNAcβ1-4Galβ1-4Glc) and its precursor, asialo-GM1 (Galβ1-3GalNAcβ1-4Galβ1-4Glc). SeviL also interacts weakly with the glycan moiety of SSEA-4 hexaose (Neu5Acα2-3Galβ1-3GalNAcβ1-3Galα1-4Galβ1-4Glc). A partial protein sequence of the lectin was determined by mass spectrometry, and the complete sequence was identified from transcriptomic analysis. SeviL, consisting of 129 amino acids, was classified as an R(icin B)-type lectin, based on the presence of the QxW motif characteristic of this fold. SeviL mRNA is highly expressed in gills and, in particular, mantle rim tissues. Orthologue sequences were identified in other species of the family Mytilidae, including Mytilus galloprovincialis, from which lectin MytiLec-1 was isolated and characterized in our previous studies. Thus, mytilid species contain lectins belonging to at least two distinct families (R-type lectins and mytilectins) that have a common β-trefoil fold structure but differing glycan-binding specificities. SeviL displayed notable cytotoxic (apoptotic) effects against various cultured cell lines (human breast, ovarian, and colonic cancer; dog kidney) that possess asialo-GM1 oligosaccharide at the cell surface. This cytotoxic effect was inhibited by the presence of anti-asialo-GM1 oligosaccharide antibodies. With HeLa ovarian cancer cells, SeviL showed dose- and time-dependent activation of kinase MKK3/6, p38 MAPK, and caspase-3/9. The transduction pathways activated by SeviL via the glycosphingolipid oligosaccharide were triggered apoptosis. DATABASE: Nucleotide sequence data have been deposited in the GenBank database under accession numbers MK434191, MK434192, MK434193, MK434194, MK434195, MK434196, MK434197, MK434198, MK434199, MK434200, and MK434201.

Indexed as

AnimalsBinding SitesG(M1) GangliosideHeLa CellsHumansLectinsMitogen-Activated Protein KinasesMytilidaeOligosaccharidesSpecies Specificityasialo GM1 gangliosideganglioside M1bG(M1) GangliosideLectinsMitogen-Activated Protein KinasesOligosaccharidesbivalvesgangliosideMytilisepta virgatapurplish bifurcate musselsR-type lectin

Identifiers

PMID31769916
PMCPMC7317968
OpenAlexW2990012481

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.