Evidence map›Paper›PMID 31769194›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2020

Preparing a Single Cell Suspension from Zebrafish Retinal Tissue for Flow Cytometric Cell Sorting of Müller Glia.

Kristin Allan, Rose DiCicco, Michael Ramos, Kewal Asosingh, Alex Yuan

Abstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kristin AllanDepartment of Molecular Medicine, Cleveland Clinic Lerner College of Medicine of Case Western Reserve University, Cleveland, Ohio.ORCID 0000-0001-6336-0431
Rose DiCiccoDepartment of Ophthalmic Research, Lerner Research Institute, The Cleveland Clinic, Cleveland, Ohio.
Michael RamosDepartment of Ophthalmic Research, Lerner Research Institute, The Cleveland Clinic, Cleveland, Ohio.
Kewal AsosinghDepartment of Inflammation and Immunity, Lerner Research Institute, The Cleveland Clinic, Cleveland, Ohio.
Alex YuanDepartment of Ophthalmic Research, Lerner Research Institute, The Cleveland Clinic, Cleveland, Ohio.ORCID 0000-0003-0191-8035

Funding

RESOURCE/SERVICE CORE C - MOLECULAR INFORMATICS MODULEP30EY025585 · NEI · CLEVELAND CLINIC LERNER COM-CWRU · PI BELA ANAND-APTE · 2016 to 2026
$7.7M
Molecular Medicine Training ProgramT32GM088088 · NIGMS · CLEVELAND CLINIC LERNER COM-CWRU · PI SMITH, JONATHAN D · 2011 to 2020
$1.7M
A Comparison of the Retinal Microglial Cell Response to Injury in Mice and ZebrafK08EY023608 · NEI · CLEVELAND CLINIC LERNER COM-CWRU · PI YUAN, ALEX · 2013 to 2017
$1.0M
Cole Eye Institute Vision Science Training ProgramT32EY024236 · NEI · CLEVELAND CLINIC LERNER COM-CWRU · PI ANAND-APTE, BELA · 2015 to 2025
$1.0M
NEI NIH HHS K08 EY023608NEI NIH HHS P30 EY025585NEI NIH HHS T32 EY024236NIGMS NIH HHS T32 GM088088
6 · The paper itself

Abstract

Preparation of a single cell suspension from solid tissue is vital for a successful flow cytometry experiment. We report a detailed and reproducible method to produce a quality cell suspension from the zebrafish retina. Zebrafish retinas, especially their Müller glia cells, are of particular interest for their inherent regenerative capacity, making them a useful model for regenerative medicine and cell therapy research. Here, we detail a papain-based dissociation that is gentle enough to keep cells intact, but strong enough to disrupt cell-cell and cell-matrix interactions to yield a cell suspension that produces clean and reliable flow cytometric cell sorting results. This procedure consistently results in over 90% viability and three populations of cells based on GFP expression. The dissociation procedure described herein has been optimized for the collection of Müller glia from Tg(apoe:gfp) zebrafish retinas; however, the overall process may be applicable to other cell types in the fish retina, additional flow cytometric techniques, or preparing cell suspensions from similar tissues. © 2019 International Society for Advancement of Cytometry.

Indexed as

RetinaZebrafishAnimalsCell ProliferationFlow CytometryNeurogliadissociationflow cytometric cell sortingMüller gliapapainzebrafish retina

Identifiers

PMID31769194
PMCPMC7246168

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.