Evidence map›Paper›PMID 31768671›Full record

ArticleActa neuropathologica2020

Molecular subgrouping of primary pineal parenchymal tumors reveals distinct subtypes correlated with clinical parameters and genetic alterations.

Elke Pfaff, Christian Aichmüller, Martin Sill, Damian Stichel, Matija Snuderl, Matthias A Karajannis, Martin U Schuhmann, Jens Schittenhelm, Martin Hasselblatt, Christian Thomas and 19 more

Open access · greenAbstract read
In one paragraph

Article in Acta neuropathologica, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 2 pooled it
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 2 syntheses or guidelines pooled it, 88 citations in OpenAlex.

  1. A systematic review of adult pineoblastoma.Frontiers in oncology · 2024
    Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Histopathology and Molecular Pathology of Pineal Region Tumors.Advances and technical standards in neurosurgery · 2026
    Review
  11. Pineal Gland Parenchyma Tumors.Advances and technical standards in neurosurgery · 2026
    Review
  12. Article
  13. Article
  14. Article
  15. PXA-like tumors: prognostic implications.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2025
    Article
  16. Cancers · 2025
    Review
  17. Germline Pathogenic DROSHA Variants Are Linked to Pineoblastoma and Wilms Tumor Predisposition.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Article
  18. Multidisciplinary treatment of a rare rapidly progressive intracranial myxoid mesenchymal tumor of uncertain differentiation FET-CREB fusion-negative.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2025
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 10 institutions in 3 countries.

Elke PfaffHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Christian AichmüllerDivision of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Martin SillHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Damian StichelDepartment of Neuropathology, Institute of Pathology, University Hospital Heidelberg, Heidelberg, Germany.
Matija SnuderlDivision of Neuropathology, NYU Langone Health, New York, USA.
Matthias A KarajannisDepartment of Pediatrics, Memorial Sloan Kettering Cancer Center, New York, USA.
Martin U SchuhmannDivision of Pediatric Neurosurgery, Department of Neurosurgery, Eberhard Karl's University Hospital of Tübingen, Tübingen, Germany.
Jens SchittenhelmInstitute of Neuropathology, Department of Pathology and Neuropathology, University of Tübingen, Comprehensive Cancer Center Tübingen-Stuttgart, Tübingen, Germany.
Martin HasselblattInstitute of Neuropathology, University Hospital Münster, Munster, Germany.
Christian ThomasInstitute of Neuropathology, University Hospital Münster, Munster, Germany.
Andrey KorshunovDepartment of Neuropathology, Institute of Pathology, University Hospital Heidelberg, Heidelberg, Germany.
Marina RhizovaDepartment of Neuropathology, Burdenko Neurosurgical Institute, Moscow, Russia.
Andrea WittmannHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Anna KaufholdHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Murat IskarDivision of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Petra KettelerPediatrics III, Pediatric Oncology and Hematology, University Hospital Essen, Essen, Germany.
Dietmar LohmannEye Cancer Genetics, Institute of Human Genetics, University Hospital Essen, Essen, Germany.
Brent A OrrDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, USA.
David W EllisonDepartment of Pathology, St. Jude Children's Research Hospital, Memphis, USA.
Katja von HoffDepartment of Pediatric Oncology/Hematology, Charité-Universitätsmedizin Berlin, Berlin, Germany.
Martin MynarekDepartment of Paediatric Haematology and Oncology, University Medical Centre Hamburg-Eppendorf, Hamburg, Germany.
Stefan RutkowskiDepartment of Paediatric Haematology and Oncology, University Medical Centre Hamburg-Eppendorf, Hamburg, Germany.
Felix SahmHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Andreas von DeimlingDepartment of Neuropathology, Institute of Pathology, University Hospital Heidelberg, Heidelberg, Germany.
Peter LichterDivision of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Marcel KoolHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Marc ZapatkaDivision of Molecular Genetics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Stefan M PfisterHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
David T W JonesHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany. david.jones@kitz-heidelberg.de.ORCID http://orcid.org/0000-0002-2036-5141
German Cancer Research Center · DEUniversität Hamburg · DESt. Jude Children's Research Hospital · USUniversity Hospital Münster · DEBurdenko Neurosurgery Institute · RUEssen University Hospital · DEMemorial Sloan Kettering Cancer Center · USNYU Langone Health · USUniversity Children's Hospital Tübingen · DEUniversity of Tübingen · DE

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748Westfälische Wilhelms-Universität Münster (DE) 111807
6 · The paper itself

Abstract

Tumors of the pineal region comprise several different entities with distinct clinical and histopathological features. Whereas some entities predominantly affect adults, pineoblastoma (PB) constitutes a highly aggressive malignancy of childhood with a poor outcome. PBs mainly arise sporadically, but may also occur in the context of cancer predisposition syndromes including DICER1 and RB1 germline mutation. With this study, we investigate clinico-pathological subgroups of pineal tumors and further characterize their biological features. We performed genome-wide DNA methylation analysis in 195 tumors of the pineal region and 20 normal pineal gland controls. Copy-number profiles were obtained from DNA methylation data; gene panel sequencing was added for 93 tumors and analysis was further complemented by miRNA sequencing for 22 tumor samples. Unsupervised clustering based on DNA methylation profiling separated known subgroups, like pineocytoma, pineal parenchymal tumor of intermediate differentiation, papillary tumor of the pineal region and PB, and further distinct subtypes within these groups, including three subtypes within the core PB subgroup. The novel molecular subgroup Pin-RB includes cases of trilateral retinoblastoma as well as sporadic pineal tumors with RB1 alterations, and displays similarities with retinoblastoma. Distinct clinical associations discriminate the second novel molecular subgroup PB-MYC from other PB cases. Alterations within the miRNA processing pathway (affecting DROSHA, DGCR8 or DICER1) are found in about two thirds of cases in the three core PB subtypes. Methylation profiling revealed biologically distinct groups of pineal tumors with specific clinical and molecular features. Our findings provide a foundation for further clinical as well as molecular and functional characterization of PB and other pineal tumors, including the role of miRNA processing defects in oncogenesis.

Indexed as

Pineal GlandAdolescentAdultAgedAged, 80 and overBrain NeoplasmsCase-Control StudiesChildDNA MethylationFemaleHumansMaleMicroRNAsMiddle AgedMutationPinealomaMicroRNAsmiRNA processing pathwayMolecular subgroupingPineoblastomaTumors of the pineal region

Identifiers

PMID31768671
PMCPMC7275775
OpenAlexW2990357601

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.