Evidence map›Paper›PMID 31768607›Full record

ArticleCellular and molecular life sciences : CMLS2020

A long hypoxia-inducible factor 3 isoform 2 is a transcription activator that regulates erythropoietin.

Jussi-Pekka Tolonen, Minna Heikkilä, Marjo Malinen, Hang-Mao Lee, Jorma J Palvimo, Gong-Hong Wei, Johanna Myllyharju

Open access · hybridAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 61 citations in OpenAlex.

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  11. Hypoxia Inducible Factor-2α (HIF-2α) Pathway Inhibitors.Journal of kidney cancer and VHL · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jussi-Pekka TolonenOulu Center for Cell-Matrix Research, University of Oulu, PO Box 5400, 90014, Oulu, Finland.
Minna HeikkiläOulu Center for Cell-Matrix Research, University of Oulu, PO Box 5400, 90014, Oulu, Finland.
Marjo MalinenDepartment of Environmental and Biological Sciences, University of Eastern Finland, 80100, Joensuu, Finland.
Hang-Mao LeeBiocenter Oulu and Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014, Oulu, Finland.
Jorma J PalvimoInstitute of Biomedicine, University of Eastern Finland, 70211, Kuopio, Finland.
Gong-Hong WeiBiocenter Oulu and Faculty of Biochemistry and Molecular Medicine, University of Oulu, 90014, Oulu, Finland.
Johanna MyllyharjuOulu Center for Cell-Matrix Research, University of Oulu, PO Box 5400, 90014, Oulu, Finland. johanna.myllyharju@oulu.fi.ORCID http://orcid.org/0000-0001-7772-1250
University of Oulu · FIUniversity of Eastern Finland · FIOulu University of Applied Sciences · FI

Funding

Academy of Finland 251314Academy of Finland 296498
6 · The paper itself

Abstract

Hypoxia-inducible factor (HIF), an αβ dimer, is the master regulator of oxygen homeostasis with hundreds of hypoxia-inducible target genes. Three HIF isoforms differing in the oxygen-sensitive α subunit exist in vertebrates. While HIF-1 and HIF-2 are known transcription activators, HIF-3 has been considered a negative regulator of the hypoxia response pathway. However, the human HIF3A mRNA is subject to complex alternative splicing. It was recently shown that the long HIF-3α variants can form αβ dimers that possess transactivation capacity. Here, we show that overexpression of the long HIF-3α2 variant induces the expression of a subset of genes, including the erythropoietin (EPO) gene, while simultaneous downregulation of all HIF-3α variants by siRNA targeting a shared HIF3A region leads to downregulation of EPO and additional genes. EPO mRNA and protein levels correlated with HIF3A silencing and HIF-3α2 overexpression. Chromatin immunoprecipitation analyses showed that HIF-3α2 binding associated with canonical hypoxia response elements in the promoter regions of EPO. Luciferase reporter assays showed that the identified HIF-3α2 chromatin-binding regions were sufficient to promote transcription by all three HIF-α isoforms. Based on these data, HIF-3α2 is a transcription activator that directly regulates EPO expression.

Indexed as

Apoptosis Regulatory ProteinsBone Morphogenetic Protein 6Cell HypoxiaCell Line, TumorChromatinC-Reactive ProteinDimerizationErythropoietinGlucose Transporter Type 1HumansPentraxinsPromoter Regions, GeneticProtein BindingProtein IsoformsRepressor ProteinsRNA InterferenceApoptosis Regulatory ProteinsBMP6 protein, humanBone Morphogenetic Protein 6ChromatinC-Reactive ProteinErythropoietinGlucose Transporter Type 1HIF3A protein, humanPentraxinsProtein IsoformsRepressor ProteinsRNA, Small InterferingSerum Amyloid P-ComponentChromatin immunoprecipitationErythropoietinHypoxia-inducible factor 3 isoformHypoxia responseHypoxia response elementTranscription activator

Identifiers

PMID31768607
PMCPMC7452874
OpenAlexW2991330371

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.