Evidence map›Paper›PMID 31768071›Full record

ArticleNature genetics2019

Stalled developmental programs at the root of pediatric brain tumors.

Selin Jessa, Alexis Blanchet-Cohen, Brian Krug, Maria Vladoiu, Marie Coutelier, Damien Faury, Brice Poreau, Nicolas De Jay, Steven Hébert, Jean Monlong and 30 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 173 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
173citing papers in PubMed, 1 pooled it
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

173 citing papers in PubMed, 1 synthesis or guideline pooled it, 293 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. From developmental origins to relapse: molecular and therapeutic insights in medulloblastoma.Child's nervous system : ChNS : official journal of the International Society for Pediatric Neurosurgery · 2026
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113 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors at 17 institutions in 4 countries.

Selin JessaQuantitative Life Sciences, McGill University, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0003-4192-6523
Alexis Blanchet-CohenLady Davis Institute for Medical Research, Jewish General Hospital, Montreal, Quebec, Canada.
Brian KrugDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.
Maria VladoiuDevelopmental and Stem Cell Biology Program, The Hospital for Sick Children, Toronto, Ontario, Canada.
Marie CoutelierLady Davis Institute for Medical Research, Jewish General Hospital, Montreal, Quebec, Canada.
Damien FauryDepartment of Pediatrics, McGill University, Montreal, Quebec, Canada.
Brice PoreauDepartment of Pediatrics, McGill University, Montreal, Quebec, Canada.
Nicolas De JayLady Davis Institute for Medical Research, Jewish General Hospital, Montreal, Quebec, Canada.
Steven HébertLady Davis Institute for Medical Research, Jewish General Hospital, Montreal, Quebec, Canada.
Jean MonlongDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0002-9737-5516
W Todd FarmerCentre for Research in Neuroscience, Brain Repair and Integrative Neuroscience Program, The Research Institute of the McGill University Health Centre, Montreal General Hospital, Montreal, Quebec, Canada.
Laura K DonovanDevelopmental and Stem Cell Biology Program, The Hospital for Sick Children, Toronto, Ontario, Canada.
Yixing HuLady Davis Institute for Medical Research, Jewish General Hospital, Montreal, Quebec, Canada.
Melissa K McConechyDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.
Florence M G CavalliDevelopmental and Stem Cell Biology Program, The Hospital for Sick Children, Toronto, Ontario, Canada.
Leonie G MikaelDepartment of Pediatrics, McGill University, Montreal, Quebec, Canada.
Benjamin EllezamDepartment of Pathology, Centre Hospitalier Universitaire Sainte-Justine, Université de Montréal, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0002-8716-7924
Maxime RicherDepartment of Pathology, Centre Hospitalier Universitaire de Sherbrooke, Université de Sherbrooke, Sherbrooke, Quebec, Canada.
Andréa AllaireDepartment of Pathology, Centre Hospitalier Universitaire de Sherbrooke, Université de Sherbrooke, Sherbrooke, Quebec, Canada.
Alexander G WeilDepartment of Pediatric Neurosurgery, Centre Hospitalier Universitaire Sainte-Justine, Université de Montréal, Montreal, Quebec, Canada.
Jeffrey AtkinsonDepartment of Pediatric Surgery, Division of Neurosurgery, Montreal Children's Hospital, McGill University, Montreal, Querbec, Canada.
Jean-Pierre FarmerDepartment of Pediatric Surgery, Division of Neurosurgery, Montreal Children's Hospital, McGill University, Montreal, Querbec, Canada.
Roy W R DudleyDepartment of Pediatric Surgery, Division of Neurosurgery, Montreal Children's Hospital, McGill University, Montreal, Querbec, Canada.
Valerie LaroucheDepartment of Pediatrics, Centre mère-enfant Soleil du CHU de Québec-Université Laval, Quebec City, Quebec, Canada.
Louis CrevierDepartment of Surgery, Université de Laval, Quebec City, Quebec, Canada.
Steffen AlbrechtDepartment of Pathology, Montreal Children's Hospital, McGill University Health Center, Montreal, Quebec, Canada.
Mariella G FilbinDepartment of Pediatric Oncology, Dana-Farber/Boston Children's Cancer and Blood Disorder Center, Boston, MA, USA.
Hervé SarteletDepartment of Pathology, Centre Hospitalier Universitaire de Grenoble, Grenoble, France.
Pierre-Eric LutzCentre National de la Recherche Scientifique, Institut des Neurosciences Cellulaires et Intégratives, Université de Strasbourg, Fédération de Médecine Translationnelle de Strasbourg, Strasbourg, France.ORCID http://orcid.org/0000-0003-3383-1604
Corina NagyDepartment of Psychiatry, McGill University, Montreal, Quebec, Canada.
Gustavo TureckiDepartment of Psychiatry, McGill University, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0003-4075-2736
Santiago CostantinoMaisonneuve-Rosemont Hospital Research Center, Montreal, Quebec, Canada.
Peter B DirksDepartment of Surgery, University of Toronto, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0001-5718-6465
Keith K MuraiCentre for Research in Neuroscience, Brain Repair and Integrative Neuroscience Program, The Research Institute of the McGill University Health Centre, Montreal General Hospital, Montreal, Quebec, Canada.
Guillaume BourqueDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0002-3933-9656
Jiannis RagoussisDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada.ORCID http://orcid.org/0000-0002-8515-0934
Livia GarziaCancer Research Program, The Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada.
Michael D TaylorDevelopmental and Stem Cell Biology Program, The Hospital for Sick Children, Toronto, Ontario, Canada. mdt.cns@gmail.com.ORCID http://orcid.org/0000-0001-7009-3466
Nada JabadoDepartment of Human Genetics, McGill University, Montreal, Quebec, Canada. nada.jabado@mcgill.ca.ORCID http://orcid.org/0000-0003-2485-3692
Claudia L KleinmanLady Davis Institute for Medical Research, Jewish General Hospital, Montreal, Quebec, Canada. claudia.kleinman@mcgill.ca.ORCID http://orcid.org/0000-0002-5158-7126
Jewish General Hospital · CAMcGill University Health Centre · CAMontreal Children's Hospital · CADouglas Mental Health University Institute · CAHospital for Sick Children · CACentre Hospitalier Universitaire de Grenoble · FRCentre Hospitalier Universitaire Sainte-Justine · CAMcGill University · CAMontreal General Hospital · CAUniversité de Sherbrooke · CAUniversité Laval · CAUniversity of Toronto · CADana-Farber/Boston Children's Cancer and Blood Disorders Center · USHôpital Maisonneuve-Rosemont · CAMcGill University and Génome Québec Innovation Centre · CAOntario Genomics · CAUniversity of California, Santa Cruz · US

Funding

Shared Resources Core 2: Quantitative Proteomics CoreP01CA196539 · NCI · ROCKEFELLER UNIVERSITY · PI MUIR, TOM · 2015 to 2024
$17.6M
Mouse models to discover new drivers of medulloblastomaR01CA159859 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Michael D. Taylor, WILLIAM A WEISS · 2011 to 2026
$10.4M
Medulloblastoma and MetastasesR01CA148699 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI TAYLOR, MICHAEL D., WEISS, WILLIAM A · 2010 to 2014
$2.4M
CIHRNCI NIH HHS P01 CA196539NCI NIH HHS R01 CA148699NCI NIH HHS R01 CA159859
6 · The paper itself

Abstract

Childhood brain tumors have suspected prenatal origins. To identify vulnerable developmental states, we generated a single-cell transcriptome atlas of >65,000 cells from embryonal pons and forebrain, two major tumor locations. We derived signatures for 191 distinct cell populations and defined the regional cellular diversity and differentiation dynamics. Projection of bulk tumor transcriptomes onto this dataset shows that WNT medulloblastomas match the rhombic lip-derived mossy fiber neuronal lineage and embryonal tumors with multilayered rosettes fully recapitulate a neuronal lineage, while group 2a/b atypical teratoid/rhabdoid tumors may originate outside the neuroectoderm. Importantly, single-cell tumor profiles reveal highly defined cell hierarchies that mirror transcriptional programs of the corresponding normal lineages. Our findings identify impaired differentiation of specific neural progenitors as a common mechanism underlying these pediatric cancers and provide a rational framework for future modeling and therapeutic interventions.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBrainBrain NeoplasmsCell Line, TumorHumansInfantMedulloblastomaMiceNeoplasms, Germ Cell and EmbryonalNerve FibersProsencephalonRhabdoid TumorSingle-Cell Analysis

Identifiers

PMID31768071
PMCPMC6885128
OpenAlexW2990909677

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.