Evidence map›Paper›PMID 31767754›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

A structural basis for antibody-mediated neutralization of Nipah virus reveals a site of vulnerability at the fusion glycoprotein apex.

Victoria A Avanzato, Kasopefoluwa Y Oguntuyo, Marina Escalera-Zamudio, Bernardo Gutierrez, Michael Golden, Sergei L Kosakovsky Pond, Rhys Pryce, Thomas S Walter, Jeffrey Seow, Katie J Doores and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 75 citations in OpenAlex.

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  19. Structure and design of Langya virus glycoprotein antigens.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 2 countries.

Victoria A AvanzatoDivision of Structural Biology, Wellcome Center for Human Genetics, University of Oxford, OX3 7BN Oxford, United Kingdom.
Kasopefoluwa Y OguntuyoDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029.
Marina Escalera-ZamudioDepartment of Zoology, Oxford University, OX1 3PS Oxford, United Kingdom.
Bernardo GutierrezDepartment of Zoology, Oxford University, OX1 3PS Oxford, United Kingdom.
Michael GoldenDepartment of Zoology, Oxford University, OX1 3PS Oxford, United Kingdom.
Sergei L Kosakovsky PondInstitute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA 19122.
Rhys PryceDivision of Structural Biology, Wellcome Center for Human Genetics, University of Oxford, OX3 7BN Oxford, United Kingdom.
Thomas S WalterDivision of Structural Biology, Wellcome Center for Human Genetics, University of Oxford, OX3 7BN Oxford, United Kingdom.
Jeffrey SeowDepartment of Infectious Diseases, King's College London, Guy's Hospital, SE1 9RT London, United Kingdom.
Katie J DooresDepartment of Infectious Diseases, King's College London, Guy's Hospital, SE1 9RT London, United Kingdom.
Oliver G PybusDepartment of Zoology, Oxford University, OX1 3PS Oxford, United Kingdom.
Vincent J MunsterLaboratory of Virology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT 59840.ORCID 0000-0002-2288-3196
Benhur LeeDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029; Benhur.Lee@mssm.edu thomas.bowden@strubi.ox.ac.uk.ORCID 0000-0003-0760-1709
Thomas A BowdenDivision of Structural Biology, Wellcome Center for Human Genetics, University of Oxford, OX3 7BN Oxford, United Kingdom; Benhur.Lee@mssm.edu thomas.bowden@strubi.ox.ac.uk.ORCID 0000-0002-8066-8785
University of Oxford · GBCentre for Human Genetics · GBGuy's Hospital · GBNational Institutes of Health · USGlobal Virus Network · USIcahn School of Medicine at Mount Sinai · USTemple University · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008169 · NIGMS · EMORY UNIVERSITY · PI GROSS, ROBERT E · 1987 to 2021
$20.3M
Turning big data analysis infrastructure for HIV researchR01AI134384 · NIAID · PENNSYLVANIA STATE UNIVERSITY, THE · PI NEKRUTENKO, ANTON, POND, SERGEI L KOSAKOVSKY · 2017 to 2021
$4.2M
Tropism, pathogenicity, and potential for zoonotic spillover of emergent henipa- and henipa-like virusesR01AI123449 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LEE, BENHUR · 2016 to 2020
$2.7M
HyPhy: Molecular Evolutionary AnalysesR01GM093939 · NIGMS · TEMPLE UNIV OF THE COMMONWEALTH · PI MUSE, SPENCER V., POND, SERGEI L KOSAKOVSKY · 2010 to 2018
$2.5M
SUMO and ubiquitin modifications in henipavirus matrix trafficking and functionR01AI125536 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI LEE, BENHUR · 2016 to 2020
$2.1M
Elucidating the molecular determinants of Henipavirus envelope-antibody and envelope-receptor interactions on viral entryF31AI154739 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI OGUNTUYO, KASOPEFOLUWA Y. · 2020 to 2022
$135k
Medical Research Council MR/L009528/1Medical Research Council MR/N00065X/1Medical Research Council MR/N002091/1Medical Research Council MR/S007555/1NIAID NIH HHS F31 AI154739NIAID NIH HHS R01 AI123449NIAID NIH HHS R01 AI125536NIAID NIH HHS R01 AI134384NIGMS NIH HHS R01 GM093939NIGMS NIH HHS T32 GM008169Wellcome TrustWellcome Trust 203141/Z/16/Z
6 · The paper itself

Abstract

Nipah virus (NiV) is a highly pathogenic paramyxovirus that causes frequent outbreaks of severe neurologic and respiratory disease in humans with high case fatality rates. The 2 glycoproteins displayed on the surface of the virus, NiV-G and NiV-F, mediate host-cell attachment and membrane fusion, respectively, and are targets of the host antibody response. Here, we provide a molecular basis for neutralization of NiV through antibody-mediated targeting of NiV-F. Structural characterization of a neutralizing antibody (nAb) in complex with trimeric prefusion NiV-F reveals an epitope at the membrane-distal domain III (DIII) of the molecule, a region that undergoes substantial refolding during host-cell entry. The epitope of this monoclonal antibody (mAb66) is primarily protein-specific and we observe that glycosylation at the periphery of the interface likely does not inhibit mAb66 binding to NiV-F. Further characterization reveals that a Hendra virus-F-specific nAb (mAb36) and many antibodies in an antihenipavirus-F polyclonal antibody mixture (pAb835) also target this region of the molecule. Integrated with previously reported paramyxovirus F-nAb structures, these data support a model whereby the membrane-distal region of the F protein is targeted by the antibody-mediated immune response across henipaviruses. Notably, our domain-specific sequence analysis reveals no evidence of selective pressure at this region of the molecule, suggestive that functional constraints prevent immune-driven sequence variation. Combined, our data reveal the membrane-distal region of NiV-F as a site of vulnerability on the NiV surface.

Indexed as

Antibodies, NeutralizingHendra VirusViral Fusion ProteinsVirus InternalizationAntibodies, MonoclonalCell Line, TumorGlycosylationHEK293 CellsHumansModels, MolecularProtein BindingAntibodies, MonoclonalAntibodies, NeutralizingViral Fusion Proteinsantibody responseglycoproteinhenipavirusstructureviral fusion

Identifiers

PMID31767754
PMCPMC6911215
OpenAlexW2990311780

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.