Evidence map›Paper›PMID 31767749›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

HISTONE DEACETYLASE 9 stimulates auxin-dependent thermomorphogenesis in

Lennard C van der Woude, Giorgio Perrella, Basten L Snoek, Mark van Hoogdalem, Ondřej Novák, Marcel C van Verk, Heleen N van Kooten, Lennert E Zorn, Rolf Tonckens, Joram A Dongus and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
18.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 137 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Ecological Adaptation Mechanisms Underlying Successful Plant Reproduction.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  5. Review
  6. Article
  7. Article
  8. Epigenomics and Non-Coding RNAs in Soybean Adaptation to Abiotic Stresses.International journal of molecular sciences · 2025
    Review
  9. Seasons and shape: inflorescences from autumn to summer.Journal of experimental botany · 2025
    Review
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  15. Review
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15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 6 countries.

Lennard C van der WoudeMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.
Giorgio PerrellaInstitute of Molecular, Cell & Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, G12 8QQ Glasgow, United Kingdom.
Basten L SnoekTheoretical Biology and Bioinformatics, Institute of Biodynamics and Biocomplexity, Utrecht University, 3584 CH Utrecht, The Netherlands.
Mark van HoogdalemLaboratory of Plant Physiology, Wageningen University, 6708 PB Wageningen, The Netherlands.
Ondřej NovákUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.
Marcel C van VerkTheoretical Biology and Bioinformatics, Institute of Biodynamics and Biocomplexity, Utrecht University, 3584 CH Utrecht, The Netherlands.
Heleen N van KootenMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.
Lennert E ZornMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.
Rolf TonckensMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.
Joram A DongusMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.ORCID 0000-0002-8553-6802
Myrthe PraatMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.
Evelien A StoutenMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.
Marcel C G ProveniersMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.
Elisa VellutiniInstitute of Molecular, Cell & Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, G12 8QQ Glasgow, United Kingdom.
Eirini PatitakiInstitute of Molecular, Cell & Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, G12 8QQ Glasgow, United Kingdom.
Umidjon ShapulatovLaboratory of Plant Physiology, Wageningen University, 6708 PB Wageningen, The Netherlands.
Wouter KohlenLaboratory of Molecular Biology, Wageningen University, 6708 PB Wageningen, The Netherlands.ORCID 0000-0001-9057-2392
Sureshkumar BalasubramanianSchool of Biological Sciences, Monash University, VIC 3800, Melbourne, Australia.ORCID 0000-0002-1057-2606
Karin LjungUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden.ORCID 0000-0003-2901-189X
Alexander R van der KrolLaboratory of Plant Physiology, Wageningen University, 6708 PB Wageningen, The Netherlands.
Sjef SmeekensMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands.ORCID 0000-0001-6631-9426
Eirini KaiserliInstitute of Molecular, Cell & Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, G12 8QQ Glasgow, United Kingdom.ORCID 0000-0003-1517-4591
Martijn van ZantenMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, 3584 CH Utrecht, The Netherlands; m.vanzanten@uu.nl.ORCID 0000-0002-2810-7374
Utrecht University · NLWageningen University & Research · NLUniversity of Glasgow · GBSwedish University of Agricultural Sciences · SEMonash University · AUNational Agency for New Technologies, Energy and Sustainable Economic Development · IT

Funding

Biotechnology and Biological Sciences Research Council BB/M023079/1
6 · The paper itself

Abstract

Many plant species respond to unfavorable high ambient temperatures by adjusting their vegetative body plan to facilitate cooling. This process is known as thermomorphogenesis and is induced by the phytohormone auxin. Here, we demonstrate that the chromatin-modifying enzyme HISTONE DEACETYLASE 9 (HDA9) mediates thermomorphogenesis but does not interfere with hypocotyl elongation during shade avoidance. HDA9 is stabilized in response to high temperature and mediates histone deacetylation at the

Indexed as

ArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsGene Expression Regulation, PlantHistone DeacetylasesHistonesHot TemperatureIndoleacetic AcidsMixed Function OxygenasesProtein BindingArabidopsis ProteinsAT1G52740 protein, ArabidopsisBasic Helix-Loop-Helix ProteinsHDA9 protein, ArabidopsisHistone DeacetylasesHistonesIndoleacetic AcidsMixed Function OxygenasesPIF4 protein, ArabidopsisYUCCA8 protein, ArabidopsisArabidopsisH2A.ZHDA9shade avoidancethermomorphogenesis

Identifiers

PMID31767749
PMCPMC6911240
OpenAlexW2989955467

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.