Evidence map›Paper›PMID 31767550›Full record

ArticleThe Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology2019

Evaluation of the results of MOTAKK hepatitis C virus RNA genotyping and hepatitis delta virus external quality assessment programs during 2015-2016.

Ersin Karataylı, Ege Soydemir, Zeynep Büşra Aksoy, Mehtap Kızılpınar, Aylin Altay Koçak, Senem Ceren Karataylı, Esra Yurdcu, Umut Yıldırım, Haluk Güriz, Gülendam Bozdayı and 5 more

Abstract readEvaluation Study
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Article in The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

15 authors.

Ersin KarataylıHepatology Institute, Ankara University, Ankara, Turkey.
Ege SoydemirBiotechnology Institute, Ankara University, Ankara, Turkey.
Zeynep Büşra AksoyBiotechnology Institute, Ankara University, Ankara, Turkey.
Mehtap KızılpınarHepatology Institute, Ankara University, Ankara, Turkey.
Aylin Altay KoçakHepatology Institute, Ankara University, Ankara, Turkey;Department of Medical Microbiology, Başkent University School of Medicine, Ankara, Turkey.
Senem Ceren KarataylıHepatology Institute, Ankara University, Ankara, Turkey.
Esra YurdcuHepatology Institute, Ankara University, Ankara, Turkey.
Umut YıldırımTomurcuk Technology, Cyberpark, Bilkent, Ankara, Turkey.
Haluk GürizCebeci Central Laboratory, Ankara University School of Medicine, Ankara, Turkey.
Gülendam BozdayıDepartment of Medical Microbiology, Gazi University School of Medicine, Ankara, Turkey.
Cihan YurdaydınDepartment of Gastroenterology, Ankara University School of Medicine, Ankara, Turkey.
Osman İlhanDepartment of Haemotology, Ankara University School of Medicine, Ankara, Turkey.
Yasin YıldırımDepartment of Haemotology, Therapeutic Apheresis Center, Ankara University School of Medicine, Ankara, Turkey.
Motakk Hcv Genotype And Hdv Study Group
A Mithat BozdayıHepatology Institute, Ankara University, Ankara, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND/

aimsTo evaluate the HCV RNA genotyping and HDV RNA tests that are performed in molecular microbiology laboratories in Turkey as part of a national external quality assessment programme, MOTAKK (Moleküler Tanıda Kalite Kontrol) (English translation: Quality control in molecular diagnostics). MATERIALS AND

methodsPlasmas having different HCV RNA genotypes were used to prepare HCV genotype control sera. The HDV RNA main stock was prepared from patients with chronic delta hepatitis who had a significant amount of viral load detected, as per the WHO reference materials on viral load studies that were compiled for the purpose of developing HDV RNA control sera. Samples with different viral loads were prepared from this main stock by dilution. The prepared controls were delivered to the registered laboratories. The laboratories carried out the relevant tests and entered their results via the MOTAKK web page. External quality assessment (EQA) reports of the participants were uploaded to the website as well.

resultsIn total, there were 23 participating laboratories, out of which 20 exclusively performed HCV genotyping, and 15 and 16 only performed HDV RNA in 2015 and 2016, respectively. The success rate of the results of the HCV genotype was 56-96% in 2015 and 30-95% in 2016. The tube with a 30% success rate had a recombinant type of HCV, therefore, it could not be detected in most of the laboratories. The HDV RNA results were evaluated qualitatively. Accordingly, HDV RNA detection rates of participant laboratories were 71-100% in 2015 and 50-100% in 2016.

conclusionThis study was the first national external quality control program in Turkey regarding HCV RNA genotyping and HDV RNA in the field of molecular microbiology, and it was implemented successfully.

Indexed as

Quality ControlGenotyping TechniquesHepacivirusHepatitis C, ChronicHepatitis D, ChronicHepatitis Delta VirusHumansProgram EvaluationQuality Assurance, Health CareRNA, ViralTurkeyViral LoadRNA, Viral

Identifiers

PMID31767550
PMCPMC6883996

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