Evidence map›Paper›PMID 31766457›Full record

ArticleInternational journal of molecular sciences2019

Cellular Processes Involved in Jurkat Cells Exposed to Nanosecond Pulsed Electric Field.

Huijuan Li, Shibin Liu, Xue Yang, Yongqian Du, Jiezhang Luo, Jie Tan, Yulong Sun

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Electrostimulation: A Promising New Treatment for Psoriasis.International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Huijuan LiSchool of Electronics and Information, Northwestern Polytechnical University, Xi'an 710072, China.
Shibin LiuSchool of Electronics and Information, Northwestern Polytechnical University, Xi'an 710072, China.
Xue YangSchool of Electronics and Information, Northwestern Polytechnical University, Xi'an 710072, China.
Yongqian DuSchool of Electronics and Information, Northwestern Polytechnical University, Xi'an 710072, China.
Jiezhang LuoSchool of Electronics and Information, Northwestern Polytechnical University, Xi'an 710072, China.
Jie TanSchool of Electronics and Information, Northwestern Polytechnical University, Xi'an 710072, China.
Yulong SunKey Laboratory for Space Biosciences & Biotechnology, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China.ORCID 0000-0002-6811-5926
Northwestern Polytechnical University · CN

Funding

China Postdoctoral Science Foundation No. 2017M623250Fundamental Research Funds for the Central Universities No. 3102017OQD038National Natural Science Foundation of China No. 61704139National Natural Science Foundation of China No. 61873209Seed Foundation of Innovation and Creation for Graduate Students in Northwestern Polytechnical University No. ZZ2019154Shaanxi Province Postdoctoral Science Foundation No. 2018BSHYDZZ48
6 · The paper itself

Abstract

Recently, nanosecond pulsed electric field (nsPEF) has been considered as a new tool for tumor therapy, but its molecular mechanism of function remains to be fully elucidated. Here, we explored the cellular processes of Jurkat cells exposed to nanosecond pulsed electric field. Differentially expressed genes (DEGs) were acquired from the GEO2R, followed by analysis with a series of bioinformatics tools. Subsequently, 3D protein models of hub genes were modeled by Modeller 9.21 and Rosetta 3.9. Then, a 100 ns molecular dynamics simulation for each hub protein was performed with GROMACS 2018.2. Finally, three kinds of nsPEF voltages (0.01, 0.05, and 0.5 mV/mm) were used to simulate the molecular dynamics of hub proteins for 100 ns. A total of 1769 DEGs and eight hub genes were obtained. Molecular dynamic analysis, including root mean square deviation (RMSD), root mean square fluctuation (RMSF), and the R

Indexed as

ElectricityGene Expression Regulation, LeukemicElectric StimulationElectromagnetic FieldsGene Expression ProfilingGenes, EssentialHumansJurkat CellsMolecular Dynamics SimulationPrecursor T-Cell Lymphoblastic Leukemia-LymphomaProtein BindingSignal Transductionbioinformatics analysisJurkatmicroarraymolecular dynamics simulationnanosecond pulsed electric field (nsPEF)

Identifiers

PMID31766457
PMCPMC6929111
OpenAlexW2991244953

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.