Evidence map›Paper›PMID 31766405›Full record

ArticleGenes2019

Genomic Analysis of Spontaneous Abortion in Holstein Heifers and Primiparous Cows.

Kayleen F Oliver, Alexandria M Wahl, Mataya Dick, Jewel A Toenges, Jennifer N Kiser, Justine M Galliou, Joao G N Moraes, Gregory W Burns, Joseph Dalton, Thomas E Spencer and 1 more

Open access · goldAbstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Genomic Prediction for Abortion in Lactating Holstein Dairy Cows.Animals : an open access journal from MDPI · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Kayleen F OliverDepartment of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA 646310, USA.
Alexandria M WahlDepartment of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA 646310, USA.
Mataya DickDepartment of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA 646310, USA.
Jewel A ToengesDepartment of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA 646310, USA.
Jennifer N KiserDepartment of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA 646310, USA.
Justine M GalliouDepartment of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA 646310, USA.
Joao G N MoraesAnimal Sciences Research Center, Division of Animal Sciences, University of Missouri, Columbia, MO S158A, USA.
Gregory W BurnsAnimal Sciences Research Center, Division of Animal Sciences, University of Missouri, Columbia, MO S158A, USA.
Joseph DaltonDepartment of Animal and Veterinary Sciences, University of Idaho, Caldwell, ID 1904 E, USA.ORCID 0000-0003-4397-6647
Thomas E SpencerAnimal Sciences Research Center, Division of Animal Sciences, University of Missouri, Columbia, MO S158A, USA.
Holly L NeibergsDepartment of Animal Sciences and Center for Reproductive Biology, Washington State University, Pullman, WA 646310, USA.
Washington State University · USUniversity of Missouri · USUniversity of Idaho · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe objectives of this study were to identify loci, positional candidate genes, gene-sets, and pathways associated with spontaneous abortion (SA) in cattle and compare these results with previous human SA studies to determine if cattle are a good SA model for humans. Pregnancy was determined at gestation day 35 for Holstein heifers and cows. Genotypes from 43,984 SNPs of 499 pregnant heifers and 498 pregnant cows that calved at full term (FT) were compared to 62 heifers and 28 cows experiencing SA. A genome-wide association analysis, gene-set enrichment analysis-single nucleotide polymorphism, and ingenuity pathway analysis were used to identify regions, pathways, and master regulators associated with SA in heifers, cows, and a combined population.

resultsTwenty-three loci and 21 positional candidate genes were associated (

conclusionsOne locus associated with SA was validated and 39 positional candidate and leading-edge genes and 2 gene-sets were enriched in SA in cattle and in humans.

Indexed as

Abortion, SpontaneousAnimalsCattleFemaleGenome-Wide Association StudyGenomicsPhenotypePolymorphism, Single NucleotidePregnancycattledairylocispontaneous abortion

Identifiers

PMID31766405
PMCPMC6969913
OpenAlexW2991208422

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.