Evidence map›Paper›PMID 31766203›Full record

ArticleBiosensors2019

Characterization of an Aptamer Directed against 25-Hydroxyvitamin D for the Development of a Competitive Aptamer-Based Assay.

Marc Prante, Torsten Schüling, Bernhard Roth, Kort Bremer, Johanna Walter

Abstract read
In one paragraph

Article in Biosensors, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. An AuNPs-based electrochemical aptasensor for the detection of 25-hydroxy vitamin DAnalytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2024
    Article
  7. Article
  8. Article
  9. Novel DNA Aptameric Sensors to Detect the Toxic Insecticide Fenitrothion.International journal of molecular sciences · 2021
    Article
  10. Review
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Marc PranteInstitute of Technical Chemistry, Leibniz University of Hannover, 30167 Hannover, Germany.ORCID 0000-0001-5754-7339
Torsten SchülingInstitute of Technical Chemistry, Leibniz University of Hannover, 30167 Hannover, Germany.
Bernhard RothHannover Centre for Optical Technologies, Leibniz University of Hannover, 30167 Hannover, Germany.ORCID 0000-0001-9389-7125
Kort BremerHannover Centre for Optical Technologies, Leibniz University of Hannover, 30167 Hannover, Germany.
Johanna WalterInstitute of Technical Chemistry, Leibniz University of Hannover, 30167 Hannover, Germany.

Funding

Bundesministerium für Wirtschaft und Energie 03EFHNI059Deutsche Forschungsgemeinschaft 390833453European Social Fund 03EFHNI059
6 · The paper itself

Abstract

Detection of the small molecule 25-hydroxyvitamin D (25(OH)D) as the most relevant marker for vitamin D supply suffers from a high variability of results using the current detection methods, such as high-performance liquid chromatography (HPLC) and immunoassays. A new detection approach using a highly specific aptamer directed against 25(OH)D was established in this study based on the target-induced dissociation (TID) sensing approach. In this work, the aptamer was investigated regarding its structural properties as well as its binding affinity by using microscale thermophoresis (MST). Moreover, complementary oligonucleotides were designed based on the aptamer structure and were evaluated in MST experiments. Binding experiments of immobilized aptamers were conducted in microarray experiments. It could be shown that the aptamer exhibited the usual B-DNA structure and did not form any G-quadruplexes. The design of complementary oligonucleotides for the TID assay identified a putative 25(OH)D binding site within the aptamer. The limit of detection of the established competitive assay was determined to be 5.4 nM, which sets the stage for the development of a biosensor system.

Indexed as

Biosensing TechniquesAptamers, NucleotideBinding SitesVitamin D25-hydroxyvitamin DAptamers, NucleotideVitamin D25(OH)Daptamerbiosensingmicroarraysmall molecules

Identifiers

PMID31766203
PMCPMC6956098

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.