Evidence map›Paper›PMID 31763364›Full record

ArticleAmerican journal of clinical and experimental urology2019

Bioinformatics analyses of publicly available NEPCa datasets.

Siyuan Cheng, Xiuping Yu

Open access · greenAbstract read
In one paragraph

Article in American journal of clinical and experimental urology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 20 citations in OpenAlex.

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  18. FOXA2 promotes prostate cancer growth in the bone.American journal of translational research · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Siyuan ChengDepartment of Biochemistry and Molecular Biology, LSU Health-Shreveport Shreveport, USA.
Xiuping YuDepartment of Biochemistry and Molecular Biology, LSU Health-Shreveport Shreveport, USA.
Louisiana State University Health Sciences Center Shreveport · US

Funding

Tracking & Evaluation CoreU54GM104940 · NIGMS · LSU PENNINGTON BIOMEDICAL RESEARCH CTR · PI Leigh Lamonica · 2012 to 2026
$69.1M
Androgen Deprivation Activates Wnt/Beta-Catenin Signaling in Prostate CancerR01CA226285 · NCI · LOUISIANA STATE UNIV HSC SHREVEPORT · PI YU, XIUPING · 2018 to 2022
$1.6M
the role of EZH2 in neuroendocrine prostate cancerR03CA212567 · NCI · LOUISIANA STATE UNIV HSC SHREVEPORT · PI YU, XIUPING · 2017 to 2018
$145k
NCI NIH HHS R01 CA226285NCI NIH HHS R03 CA212567NIGMS NIH HHS U54 GM104940
6 · The paper itself

Abstract

Gene expression profiles are valuable resources for the identification of key players that driver disease progression. However, neuroendocrine prostate cancer (NEPCa) specimens are rare, limiting research on this aggressive disease. In this study, we generated a 12-gene signature of NEPCa and used this signature to differentiate NEPCa from prostate adenocarcinoma (AdPCa) samples in publicly available datasets. From these samples, we identified genes that were differentially expressed in NEPCa and AdPCa. Gene ontology and network analyses revealed key players in the pathogenesis of NEPCa, including E2Fs, members of MHC class II, and factors involved in neuron differentiation, neurogenesis, and stem cell signaling. In conclusion, we identified a 12-gene signature of NEPCa and found pathways that are important for the pathologic development of NEPCa.

Indexed as

Neuroendocrineprostate cancersignature

Identifiers

PMID31763364
PMCPMC6872473
OpenAlexW2997758429

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.