ArticleSIAM journal on applied dynamical systems2018
Model Rejection and Parameter Reduction via Time Series.
Article in SIAM journal on applied dynamical systems, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
14 citing papers in PubMed.
- The Emergent Architecture of Autonomous Clocks Described by Computational Algorithms of Regulatory Networks.Advances in experimental medicine and biology · 2026Article
- Genetic network structure and dynamics: identifying simple negative feedback loops.Interface focus · 2025Article
- Network topology and interaction logic determine states it supports.NPJ systems biology and applications · 2024Review
- A yeast cell cycle pulse generator model shows consistency with multiple oscillatory and checkpoint mutant datasets.Mathematical biosciences · 2024Article
- Oscillator death in coupled biochemical oscillators.Mathematics of control, signals, and systems : MCSS · 2023Article
- Assessing biological network dynamics: comparing numerical simulations with analytical decomposition of parameter space.NPJ systems biology and applications · 2023Article
- Experimental guidance for discovering genetic networks through hypothesis reduction on time series.PLoS computational biology · 2022Article
- Inherent Dynamics Visualizer, an Interactive Application for Evaluating and Visualizing Outputs from a Gene Regulatory Network Inference Pipeline.Journal of visualized experiments : JoVE · 2021Article
- Multi-parameter exploration of dynamics of regulatory networks.Bio Systems · 2020Review
- Using extremal events to characterize noisy time series.Journal of mathematical biology · 2020Article
- Multistability in the epithelial-mesenchymal transition network.BMC bioinformatics · 2020Article
- Comparison of Combinatorial Signatures of Global Network Dynamics Generated by Two Classes of ODE Models.SIAM journal on applied dynamical systems · 2019Article
- Identifying robust hysteresis in networks.PLoS computational biology · 2018Article
- Model Rejection and Parameter Reduction via Time Series.SIAM journal on applied dynamical systems · 2018Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
Abstract
We show how a graph algorithm for finding matching labeled paths in pairs of labeled directed graphs can be used to perform model invalidation for a class of dynamical systems including regulatory network models of relevance to systems biology. In particular, given a partial order of events describing local minima and local maxima of observed quantities from experimental time series data, we produce a labeled directed graph we call the
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Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.