Evidence map›Paper›PMID 31762388›Full record

ArticlePlant signaling & behavior2020

Versatile method for quantifying and analyzing morphological differences in experimentally obtained images.

Kristine S Bagdassarian, Katherine A Connor, Ian H Jermyn, J Peter Etchells

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 92% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kristine S BagdassarianDepartment of Biosciences, Durham University, Durham, UK.ORCID 0000-0002-4853-3354
Katherine A ConnorDepartment of Biosciences, Durham University, Durham, UK.ORCID 0000-0002-7322-1387
Ian H JermynDepartment of Mathematical Sciences, Durham University, Durham, UK.ORCID 0000-0002-6546-6173
J Peter EtchellsDepartment of Biosciences, Durham University, Durham, UK.ORCID 0000-0002-8524-4949
Durham University · GB

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Analyzing high-resolution images to gain insight into anatomical properties is an essential tool for investigation in many scientific fields. In plant biology, studying plant phenotypes from micrographs is often used to build hypotheses on gene function. In this report, we discuss a bespoke method for inspecting the significance in the differences between the morphologies of several plant mutants at cellular level. By examining a specific example in the literature, we will detail the approach previously used to quantify the effects of two gene families on the vascular development of hypocotyls in

Indexed as

AlgorithmsArabidopsisGene Expression Regulation, PlantPhloemXylemImage analysismethodmorphologyparenchymaphloemxylem

Identifiers

PMID31762388
PMCPMC7012139
OpenAlexW2990469416

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.