Evidence map›Paper›PMID 31762145›Full record

ArticleProtein science : a publication of the Protein Society2020

Structural and functional characterization of three Type B and C chloramphenicol acetyltransferases from Vibrio species.

Ashley Alcala, Guadalupe Ramirez, Allan Solis, Youngchang Kim, Kemin Tan, Oscar Luna, Karen Nguyen, Daniel Vazquez, Michael Ward, Min Zhou and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Emerging antibiotic resistance by various novel proteins/enzymes.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Strain belonging to an emerging, virulent sublineage of ST131Frontiers in cellular and infection microbiology · 2023
    Article
  10. Review
  11. Article
  12. Virulence and Antibiotic Resistance Characteristics ofFrontiers in cellular and infection microbiology · 2021
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Ashley AlcalaSan Francisco State University, Department of Chemistry and Biochemistry, San Francisco, California.
Guadalupe RamirezSan Francisco State University, Department of Chemistry and Biochemistry, San Francisco, California.
Allan SolisSan Francisco State University, Department of Chemistry and Biochemistry, San Francisco, California.
Youngchang KimCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.
Kemin TanCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.
Oscar LunaSan Francisco State University, Department of Chemistry and Biochemistry, San Francisco, California.
Karen NguyenSan Francisco State University, Department of Chemistry and Biochemistry, San Francisco, California.
Daniel VazquezSan Francisco State University, Department of Chemistry and Biochemistry, San Francisco, California.
Michael WardSan Francisco State University, Department of Chemistry and Biochemistry, San Francisco, California.
Min ZhouCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.
Rory MulliganCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.
Natalia MaltsevaCenter for Structural Genomics of Infectious Diseases, Consortium for Advanced Science and Engineering, University of Chicago, Chicago, Illinois.
Misty L KuhnSan Francisco State University, Department of Chemistry and Biochemistry, San Francisco, California.ORCID 0000-0002-7951-9141
San Francisco State University · USArgonne National Laboratory · US

Funding

NIAID NIH HHS HHSN272201200026CNIAID NIH HHS HHSN272201700060C
6 · The paper itself

Abstract

Chloramphenicol acetyltransferases (CATs) were among the first antibiotic resistance enzymes identified and have long been studied as model enzymes for examining plasmid-mediated antibiotic resistance. These enzymes acetylate the antibiotic chloramphenicol, which renders it incapable of inhibiting bacterial protein synthesis. CATs can be classified into different types: Type A CATs are known to be important for antibiotic resistance to chloramphenicol and fusidic acid. Type B CATs are often called xenobiotic acetyltransferases and adopt a similar structural fold to streptogramin acetyltransferases, which are known to be critical for streptogramin antibiotic resistance. Type C CATs have recently been identified and can also acetylate chloramphenicol, but their roles in antibiotic resistance are largely unknown. Here, we structurally and kinetically characterized three Vibrio CAT proteins from a nonpathogenic species (Aliivibrio fisheri) and two important human pathogens (Vibrio cholerae and Vibrio vulnificus). We found all three proteins, including one in a superintegron (V. cholerae), acetylated chloramphenicol, but did not acetylate aminoglycosides or dalfopristin. We also determined the 3D crystal structures of these CATs alone and in complex with crystal violet and taurocholate. These compounds are known inhibitors of Type A CATs, but have not been explored in Type B and Type C CATs. Based on sequence, structure, and kinetic analysis, we concluded that the V. cholerae and V. vulnificus CATs belong to the Type B class and the A. fisheri CAT belongs to the Type C class. Ultimately, our results provide a framework for studying the evolution of antibiotic resistance gene acquisition and chloramphenicol acetylation in Vibrio and other species.

Indexed as

Amino Acid SequenceChloramphenicol O-AcetyltransferaseCrystallography, X-RayModels, MolecularPhylogenyProtein ConformationSequence AlignmentSpecies SpecificityVibrioChloramphenicol O-AcetyltransferaseAliivibrio fischeriantibiotic resistancebiochemical educationchloramphenicol acetyltransferasefunctional characterizationgene annotationintegronVibrio choleraeVibrio vulnificusxenobiotic acetyltransferase

Identifiers

PMID31762145
PMCPMC7020993
OpenAlexW2989968250

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.