Evidence map›Paper›PMID 31761783›Full record

ArticleAging2019

Large-scale analyses identify a cluster of novel long noncoding RNAs as potential competitive endogenous RNAs in progression of hepatocellular carcinoma.

Mengjia Song, Ailin Zhong, Jieying Yang, Junyi He, Shaoyan Cheng, Jianxiong Zeng, Yue Huang, Qiuzhong Pan, Jingjing Zhao, Ziqi Zhou and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Aging, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Mengjia SongDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Ailin ZhongOffice of International Exchange and Cooperation, Guangzhou University of Chinese Medicine, Guangzhou, People's Republic of China.
Jieying YangDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Junyi HeDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Shaoyan ChengBiotherapy Center, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Jianxiong ZengDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Yue HuangDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Qiuzhong PanDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Jingjing ZhaoDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Ziqi ZhouDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Qian ZhuDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Yan TangDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Hao ChenDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Chaopin YangDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Yuan LiuDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Xiaocong MoDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Desheng WengDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Jian-Chuan XiaDepartment of Biotherapy, Sun Yat-sen University Cancer Center, Guangzhou, P. R. China.
Sun Yat-sen University · CNSun Yat-sen University Cancer Center · CNFirst Affiliated Hospital of Zhengzhou University · CNGuangzhou University of Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The abnormal expression of noncoding RNAs has attracted increasing interest in the field of hepatocellular carcinoma progression. However, the underlying molecular mechanisms mediated by noncoding RNAs in these processes are unclear. Here, we obtained the expression profiles of long noncoding RNAs, microRNAs, and mRNAs from the Gene Expression Omnibus database and identified hepatocarcinogenesis-specific differentially expressed transcripts. Next, we identified significant Gene Ontology and pathway terms that the differentially expressed transcripts involved in. Using functional analysis and target prediction, we constructed a hepatocellular carcinoma-associated deregulated competitive endogenous RNA network to reveal the potential mechanisms underlying tumor progression. By analyzing The Cancer Genome Atlas dataset, six key long noncoding RNAs showed significant association with overall survival as well as strong correlation with some microRNAs and mRNAs in the competitive endogenous RNA network. We further validated the above results and determined their diagnostic and prognostic value in clinical samples. Importantly, by large-scale analyses, we identified a cluster of long noncoding RNAs,

Indexed as

Carcinoma, HepatocellularDisease ProgressionGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansLiver NeoplasmsRNA, Long NoncodingTranscriptomeRNA, Long NoncodingCeRNAhepatocellular carcinomalncRNAprogression

Identifiers

PMID31761783
PMCPMC6914412
OpenAlexW2991196992

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.