Evidence map›Paper›PMID 31760151›Full record

ArticleNeuroImage2020

QSMGAN: Improved Quantitative Susceptibility Mapping using 3D Generative Adversarial Networks with increased receptive field.

Yicheng Chen, Angela Jakary, Sivakami Avadiappan, Christopher P Hess, Janine M Lupo

Abstract read
In one paragraph

Article in NeuroImage, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. IncorporatingFrontiers in neuroscience · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. WaveSep: A Flexible Wavelet-Based Approach for Source Separation in Susceptibility Imaging.Machine learning in clinical neuroimaging : 6th international workshop, MLCN 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, proceedings. MLCN (Workshop) (6th : 2023 : Vancouver, B.C.) · 2023
    Article
  10. Article
  11. Article
  12. [A multi-channel input convolutional neural network for artifact reduction in quantitative susceptibility mapping].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2022
    Article
  13. HFP-QSMGAN: QSM from homodyne-filtered phase images.Magnetic resonance in medicine · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yicheng ChenFrom the UCSF/UC Berkeley Graduate Program in Bioengineering, University of California, San Francisco and Berkeley, CA, USA; From the Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, USA.
Angela JakaryFrom the Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, USA.
Sivakami AvadiappanFrom the Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, USA.
Christopher P HessFrom the Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, USA.
Janine M LupoFrom the UCSF/UC Berkeley Graduate Program in Bioengineering, University of California, San Francisco and Berkeley, CA, USA; From the Department of Radiology and Biomedical Imaging, University of California San Francisco, San Francisco, CA, USA. Electronic address: Janine.Lupo@ucsf.edu.

Funding

IMPROVED MONITORING OF PREMANIFEST AND EARLY HUNTINGTONS USING 7T MULTIMODAL MRIR01NS099564 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HESS, CHRISTOPHER PAUL, LUPO, JANINE MARIE · 2017 to 2021
$3.0M
NINDS NIH HHS R01 NS099564
6 · The paper itself

Abstract

Quantitative susceptibility mapping (QSM) is a powerful MRI technique that has shown great potential in quantifying tissue susceptibility in numerous neurological disorders. However, the intrinsic ill-posed dipole inversion problem greatly affects the accuracy of the susceptibility map. We propose QSMGAN: a 3D deep convolutional neural network approach based on a 3D U-Net architecture with increased receptive field of the input phase compared to the output and further refined the network using the WGAN with gradient penalty training strategy. Our method generates accurate QSM maps from single orientation phase maps efficiently and performs significantly better than traditional non-learning-based dipole inversion algorithms. The generalization capability was verified by applying the algorithm to an unseen pathology--brain tumor patients with radiation-induced cerebral microbleeds.

Indexed as

Brain MappingImage Processing, Computer-AssistedMagnetic Resonance ImagingNeural Networks, ComputerAlgorithmsArtifactsBrainFemaleHumansMaleCerebral microbleedsDeep convolutional neural networksDipole field inversionGenerative adversarial networksMagnetic resonance imagingQuantitative susceptibility mapping

Identifiers

PMID31760151
PMCPMC8081272

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.