Evidence map›Paper›PMID 31759330›Full record

ArticleiScience2019

Signatures of the Evolution of Parthenogenesis and Cryptobiosis in the Genomes of Panagrolaimid Nematodes.

Philipp H Schiffer, Etienne G J Danchin, Ann M Burnell, Christopher J Creevey, Simon Wong, Ilona Dix, Georgina O'Mahony, Bridget A Culleton, Corinne Rancurel, Gary Stier and 8 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
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  5. Review
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  8. Description ofJournal of nematology · 2024
    Article
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  13. Article
  14. Article
  15. Article
  16. Article
  17. Parthenogenesis in dipterans: a genetic perspective.Proceedings. Biological sciences · 2023
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 5 countries.

Philipp H SchifferCLOE, Department for Biosciences, University College London, London, UK; Zoologisches Institut, Universität zu Köln, 50674 Köln, Germany; Institut für Genetik, Universität zu Köln, 50674 Köln, Germany. Electronic address: philipp.schiffer@gmail.com.
Etienne G J DanchinINRA, Université Côte d'Azur, CNRS, ISA, France.
Ann M BurnellMaynooth University Department of Biology, National University of Ireland Maynooth, Maynooth, Co. Kildare, Ireland.
Christopher J CreeveySchool of Biological Sciences, Queen's University Belfast, Belfast, UK.
Simon WongIrish Centre for High-End Computing, Tower Building, Trinity Technology & Enterprise Campus, Grand Canal Quay, Dublin D02 HP83, Ireland.
Ilona DixMaynooth University Department of Biology, National University of Ireland Maynooth, Maynooth, Co. Kildare, Ireland.
Georgina O'MahonyMaynooth University Department of Biology, National University of Ireland Maynooth, Maynooth, Co. Kildare, Ireland.
Bridget A CulletonMaynooth University Department of Biology, National University of Ireland Maynooth, Maynooth, Co. Kildare, Ireland; Megazyme, Bray Business Park, Bray, Co. Wicklow A98 YV29, Ireland.
Corinne RancurelINRA, Université Côte d'Azur, CNRS, ISA, France.
Gary StierZoologisches Institut, Universität zu Köln, 50674 Köln, Germany.
Elizabeth A Martínez-SalazarUnidad Académica de Ciencias Biológicas, Laboratorio de Colecciones Biológicas y Sistemática Molecular, Universidad Autónoma de Zacatecas, Zacatecas, México.
Aleksandra MarconiInstitute of Evolutionary Biology, The University of Edinburgh, Edinburgh EH9 3FL, UK.
Urmi TrivediEdinburgh Genomics, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FL, UK.
Michael KroiherZoologisches Institut, Universität zu Köln, 50674 Köln, Germany.
Michael A S ThorneBritish Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge CB3 0ET, UK.
Einhard SchierenbergZoologisches Institut, Universität zu Köln, 50674 Köln, Germany.
Thomas WieheInstitut für Genetik, Universität zu Köln, 50674 Köln, Germany.
Mark BlaxterInstitute of Evolutionary Biology, The University of Edinburgh, Edinburgh EH9 3FL, UK; Edinburgh Genomics, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FL, UK.
University of Cologne · DENational University of Ireland, Maynooth · IECentre National de la Recherche Scientifique · FREdinburgh Genomics · GBBritish Antarctic Survey · GBIrish Centre for High-End Computing · IEQueen's University Belfast · GBUniversidad Autónoma de Zacatecas "Francisco García Salinas" · MXUniversity of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research Council REI18431
6 · The paper itself

Abstract

Most animal species reproduce sexually and fully parthenogenetic lineages are usually short lived in evolution. Still, parthenogenesis may be advantageous as it avoids the cost of sex and permits colonization by single individuals. Panagrolaimid nematodes have colonized environments ranging from arid deserts to Arctic and Antarctic biomes. Many are obligatory meiotic parthenogens, and most have cryptobiotic abilities, being able to survive repeated cycles of complete desiccation and freezing. To identify systems that may contribute to these striking abilities, we sequenced and compared the genomes and transcriptomes of parthenogenetic and outcrossing panagrolaimid species, including cryptobionts and non-cryptobionts. The parthenogens are triploids, most likely originating through hybridization. Adaptation to cryptobiosis shaped the genomes of panagrolaimid nematodes and is associated with the expansion of gene families and signatures of selection on genes involved in cryptobiosis. All panagrolaimids have acquired genes through horizontal gene transfer, some of which are likely to contribute to cryptobiosis.

Indexed as

Evolutionary BiologyPhylogeneticsTranscriptomics

Identifiers

PMID31759330
PMCPMC6889759
OpenAlexW2982104206

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.