Evidence map›Paper›PMID 31758065›Full record

ArticleScientific reports2019

Integrated Transcriptomics, Proteomics, and Glycomics Reveals the Association between Up-regulation of Sialylated N-glycans/Integrin and Breast Cancer Brain Metastasis.

Wenjing Peng, Rui Zhu, Shiyue Zhou, Parvin Mirzaei, Yehia Mechref

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
  2. Article
  3. Altered Cell SurfaceJournal of proteome research · 2025
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Analytical and bioanalytical chemistry · 2024
    Article
  9. Journal of proteome research · 2024
    Article
  10. Cell-cell communication characteristics in breast cancer metastasis.Cell communication and signaling : CCS · 2024
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Glycobiology of Cancer: Sugar Drives the Show.Medicines (Basel, Switzerland) · 2022
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Wenjing PengDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, USA.
Rui ZhuDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, USA.
Shiyue ZhouDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, USA.
Parvin MirzaeiDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, USA.
Yehia MechrefDepartment of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, USA. yehia.mechref@ttu.edu.
Texas Tech University · US

Funding

Sensitive and Quantitative MS-bases Glycomic Mapping PlatformR01GM112490 · NIGMS · TEXAS TECH UNIVERSITY · PI MECHREF, YEHIA · 2014 to 2024
$3.2M
Quantitative Characterization of Glycopeptide IsomersR01GM130091 · NIGMS · TEXAS TECH UNIVERSITY · PI Yehia Mechref · 2019 to 2026
$2.5M
NIGMS NIH HHS R01 GM112490NIGMS NIH HHS R01 GM130091
6 · The paper itself

Abstract

Breast cancer brain metastasis has been recognized as one of the central issues in breast cancer research. The elucidation of the processes and pathways that mediate this step will provide important clues for a better understanding of breast cancer metastasis. Increasing evidence suggests that aberrant glycosylation patterns greatly contribute to cell invasion and cancer metastasis. Herein, we combined next-generation RNA sequencing with liquid chromatography-tandem mass spectrometry-based proteomic and N-glycomic analysis from five breast cancer cell lines and one brain cancer cell line to investigate the possible mechanisms of breast cancer brain metastasis. The genes/proteins associated with cell movement were highlighted in breast cancer brain metastasis. The integrin signaling pathway and the up-regulation of α-integrin (ITGA2, ITGA3) were associated with the brain metastatic process. 12 glycogenes showed unique expression in 231BR, which could result in an increase of sialylation during brain metastasis. In agreement with the changes of glycogenes, 60 out of 63 N-glycans that were identified exhibited differential expression among cell lines. The correlation between glycogenes and glycans revealed the importance of sialylation and sialylated glycans in breast cancer brain metastasis. Highly sialylated N-glycans, which were up-regulated in brain-seeking cell line 231BR, likely play a role in brain metastasis.

Indexed as

Brain NeoplasmsBreast NeoplasmsCell Line, TumorChromatography, LiquidFemaleGene Expression ProfilingGlycomicsGlycosylationHigh-Throughput Nucleotide SequencingHumansIntegrinsPolysaccharidesProteomeProteomicsSystems IntegrationTandem Mass SpectrometryIntegrinsPolysaccharidesProteome

Identifiers

PMID31758065
PMCPMC6874669
OpenAlexW2989615926

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.