Evidence map›Paper›PMID 31757953›Full record

ArticleNature communications2019

Disentangling the role of Africa in the global spread of H5 highly pathogenic avian influenza.

Alice Fusaro, Bianca Zecchin, Bram Vrancken, Celia Abolnik, Rose Ademun, Abdou Alassane, Abdelsatar Arafa, Joseph Adongo Awuni, Emmanuel Couacy-Hymann, M ' Bétiégué Coulibaly and 17 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 1 pooled it
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 1 synthesis or guideline pooled it, 102 citations in OpenAlex.

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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 9 institutions in 8 countries.

Alice FusaroDepartment of Comparative Biomedical Sciences, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro, Italy. afusaro@izsvenezie.it.ORCID http://orcid.org/0000-0002-8213-5472
Bianca ZecchinDepartment of Comparative Biomedical Sciences, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro, Italy.ORCID http://orcid.org/0000-0001-9566-6531
Bram VranckenKU Leuven, Department of Microbiology and Immunology, Rega Institute, Leuven, Belgium.ORCID http://orcid.org/0000-0001-6547-5283
Celia AbolnikDepartment of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Pretoria, South Africa.
Rose AdemunNational Animal Disease Diagnostics and Epidemiology Center (NADDEC), Entebbe, Uganda.
Abdou AlassaneLaboratoire Central de l'Elevage (LABOCEL), Niamey, Niger.
Abdelsatar ArafaNational Laboratory for Veterinary Quality Control on Poultry Production (NLQP), Animal Health Research Institute, Giza, Egypt.
Joseph Adongo AwuniAccra Veterinary Laboratory, Accra, Ghana.
Emmanuel Couacy-HymannLaboratoire Central de Pathologie Animale, Bingerville, Côte d'Ivoire.
M ' Bétiégué CoulibalyLaboratoire National D'Appui au Développement Agricole, Abidjan, Côte d'Ivoire.
Nicolas GaidetCIRAD, UPR GREEN, Montpellier, France.
Emilie Go-MaroLaboratoire Central Vétérinaire de Lomé, Lomé, Togo.
Tony JoannisNational Veterinary Research Institute, Vom, Nigeria.
Simon Dickmu JumboLaboratoire National Vétérinaire (LANAVET), Garoua, Cameroon.
Germaine MinoungouLaboratoire National d'Elevage de Ouagadougou, Ouagadougou, Burkina Faso.
Clement MesekoNational Veterinary Research Institute, Vom, Nigeria.ORCID http://orcid.org/0000-0001-7003-7528
Maman Moutari SouleyLaboratoire Central de l'Elevage (LABOCEL), Niamey, Niger.
Deo Birungi NdumuNational Animal Disease Diagnostics and Epidemiology Center (NADDEC), Entebbe, Uganda.ORCID http://orcid.org/0000-0001-8986-2050
Ismaila ShittuNational Veterinary Research Institute, Vom, Nigeria.
Augustin TwabelaVeterinary Laboratory of Kinshasa, Kinshasa, Democratic Republic of the Congo.ORCID http://orcid.org/0000-0003-0695-2734
Abel WadeLaboratoire National Vétérinaire (LANAVET), Yaoundé, Cameroon.
Lidewij WiersmaLaboratory Unit of the Emergency Prevention System (EMPRES), Food and Agriculture Organization of the United Nations (UN-FAO), Rome, Italy.
Yao P AkpeliLaboratoire Central Vétérinaire de Lomé, Lomé, Togo.
Gianpiero ZamperinDepartment of Comparative Biomedical Sciences, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro, Italy.
Adelaide MilaniDepartment of Comparative Biomedical Sciences, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro, Italy.
Philippe LemeyKU Leuven, Department of Microbiology and Immunology, Rega Institute, Leuven, Belgium.
Isabella MonneDepartment of Comparative Biomedical Sciences, Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro, Italy. imonne@izsvenezie.it.
Istituto Zooprofilattico Sperimentale delle Venezie · ITNational Veterinary Research Institute · NGLaboratoire National d'Appui au Développement Agricole · CIMinistry of Agriculture, Animal Industry and Fisheries · UGRega Institute for Medical Research · BEUniversity of Lomé · TGCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRFood and Agriculture Organization of the United Nations · ITUniversity of Pretoria · ZA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of Africa in the dynamics of the global spread of a zoonotic and economically-important virus, such as the highly pathogenic avian influenza (HPAI) H5Nx of the Gs/GD lineage, remains unexplored. Here we characterise the spatiotemporal patterns of virus diffusion during three HPAI H5Nx intercontinental epidemic waves and demonstrate that Africa mainly acted as an ecological sink of the HPAI H5Nx viruses. A joint analysis of host dynamics and continuous spatial diffusion indicates that poultry trade as well as wild bird migrations have contributed to the virus spreading into Africa, with West Africa acting as a crucial hotspot for virus introduction and dissemination into the continent. We demonstrate varying paths of avian influenza incursions into Africa as well as virus spread within Africa over time, which reveal that virus expansion is a complex phenomenon, shaped by an intricate interplay between avian host ecology, virus characteristics and environmental variables.

Indexed as

AfricaAfrica, WesternAnimalsHumansInfluenza A virusInfluenza A Virus, H5N1 SubtypeInfluenza A Virus, H5N8 SubtypeInfluenza, HumanInfluenza in BirdsPhylogenyPoultryPoultry Diseases

Identifiers

PMID31757953
PMCPMC6874648
OpenAlexW2990793558

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.