Evidence map›Paper›PMID 31756561›Full record

ArticleCellular and molecular gastroenterology and hepatology2020

Enteroendocrine Progenitor Cell-Enriched miR-7 Regulates Intestinal Epithelial Proliferation in an Xiap-Dependent Manner.

Ajeet P Singh, Yu-Han Hung, Michael T Shanahan, Matt Kanke, Alessandro Bonfini, Michael K Dame, Mandy Biraud, Bailey C E Peck, Oyebola O Oyesola, John M Freund and 11 more

Open access · goldAbstract read
In one paragraph

Article in Cellular and molecular gastroenterology and hepatology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Building and regenerating intestines by manipulating intestinal stem cells.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Metal transporter SLC39A14/ZIP14 modulates regulation between the gut microbiome and host metabolism.American journal of physiology. Gastrointestinal and liver physiology · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 2 countries.

Ajeet P SinghDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York.
Yu-Han HungDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York.
Michael T ShanahanDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York.
Matt KankeDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York.
Alessandro BonfiniCornell Institute of Host-Microbe Interactions and Disease. Department of Entomology, Cornell University, New York.
Michael K DameDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, Michigan.
Mandy BiraudDepartment of Molecular Biomedical Sciences, North Carolina State University, Raleigh, North Carolina.
Bailey C E PeckDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.
Oyebola O OyesolaBaker Institute of Animal Health and Department of Microbiology and Immunology, Cornell University, Ithaca, New York.
John M FreundDepartment of Clinical Sciences, North Carolina State University, Raleigh, North Carolina.
Rebecca L CubittDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York.
Ennessa G CurryDepartment of Cell Biology and Physiology, School of Medicine, University of North Carolina, Chapel Hill, North Carolina.
Liara M GonzalezDepartment of Clinical Sciences, North Carolina State University, Raleigh, North Carolina.
Gavin A BewickDiabetes Research Group, School of Life Course Sciences, Faculty of Life Sciences and Medicine, King's College London, London, United Kingdom.
Elia D Tait-WojnoBaker Institute of Animal Health and Department of Microbiology and Immunology, Cornell University, Ithaca, New York.
Natasza A KurpiosDepartment of Molecular Medicine, College of Veterinary Medicine, Cornell University, Ithaca, New York.
Shengli DingDepartment of Cell Biology and Physiology, School of Medicine, University of North Carolina, Chapel Hill, North Carolina.
Jason R SpenceDepartment of Cell and Developmental Biology, University of Michigan, Ann Arbor, Michigan.
Christopher M DekaneyDepartment of Molecular Biomedical Sciences, North Carolina State University, Raleigh, North Carolina.
Nicolas BuchonCornell Institute of Host-Microbe Interactions and Disease. Department of Entomology, Cornell University, New York.
Praveen SethupathyDepartment of Biomedical Sciences, College of Veterinary Medicine, Cornell University, Ithaca, New York. Electronic address: pr46@cornell.edu.
Cornell University · USNorth Carolina State University · USUniversity of Michigan · USUniversity of North Carolina at Chapel Hill · USKing's College London · GB

Funding

University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OMARY, BISHR · 1986 to 2021
$22.5M
Role of IL-10 in APC Regulation of Protective vs. Pathogenic T Cell Responses toP01DK094779 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SHEIKH, SHEHZAD Z. · 2013 to 2023
$17.9M
Stem Cell Differentiation CoreU19AI116482 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SPENCE, JASON, TAKAYAMA, SHUICHI · 2015 to 2019
$6.4M
UNC PREP in the Biomedical Sciences - Administrative SupplementR25GM089569 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROBINSON, DONITA L, RODRIGUEZ-ROMAGUERA, JOSE · 2010 to 2024
$5.6M
Mechanisms underlying form and function of the contractile gut lymphaticsR01DK092776 · NIDDK · CORNELL UNIVERSITY · PI Natasza A Kurpios · 2012 to 2026
$5.6M
Niche support of human intestinal stem cellsU01DK103141 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SPENCE, JASON · 2014 to 2023
$3.9M
Role of the prostaglandin D2 receptor CRTH2 in helminth-induced type 2 inflammation in the intestine.R01AI130379 · NIAID · UNIVERSITY OF WASHINGTON · PI Elia D Tait Wojno · 2017 to 2026
$3.5M
Limited Competition for the Continuation of the Intestinal Stem Cell Consortium Coordinating CenterU24DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2019 to 2023
$2.3M
The Notch Signaling Pathway Regulates Basophil Responses During Helminth InfectionR01AI132708 · NIAID · UNIVERSITY OF WASHINGTON · PI TAIT WOJNO, ELIA D · 2017 to 2021
$2.1M
Gut-specific lymphatic patterns and progenitor heterogeneity during intestinal health and diseaseR01DK107634 · NIDDK · CORNELL UNIVERSITY · PI KURPIOS, NATASZA A · 2017 to 2021
$2.0M
Mechanisms and Function of Paneth Cell Expansion After Doxorubicin-Induced DamageR01DK100508 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DEKANEY, CHRISTOPHER M · 2014 to 2018
$1.6M
Aging Intestinal Stem Cells and Insulin/IGF SystemR01AG041198 · NIA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DING, SHENGLI · 2012 to 2016
$1.5M
NIAID NIH HHS R01 AI130379NIAID NIH HHS R01 AI132708NIAID NIH HHS U19 AI116482NIA NIH HHS R01 AG041198NIDDK NIH HHS P01 DK094779NIDDK NIH HHS P30 DK034933NIDDK NIH HHS R01 DK092776NIDDK NIH HHS R01 DK100508NIDDK NIH HHS R01 DK107634NIDDK NIH HHS U01 DK103141NIDDK NIH HHS U24 DK085532NIGMS NIH HHS R25 GM089569NIH HHS K01 OD019911
6 · The paper itself

Abstract

BACKGROUND &

aimsThe enteroendocrine cell (EEC) lineage is important for intestinal homeostasis. It was recently shown that EEC progenitors contribute to intestinal epithelial growth and renewal, but the underlying mechanisms remain poorly understood. MicroRNAs are under-explored along the entire EEC lineage trajectory, and comparatively little is known about their contributions to intestinal homeostasis.

methodsWe leverage unbiased sequencing and eight different mouse models and sorting methods to identify microRNAs enriched along the EEC lineage trajectory. We further characterize the functional role of EEC progenitor-enriched miRNA, miR-7, by in vivo dietary study as well as ex vivo enteroid in mice.

resultsFirst, we demonstrate that miR-7 is highly enriched across the entire EEC lineage trajectory and is the most enriched miRNA in EEC progenitors relative to Lgr5+ intestinal stem cells. Next, we show in vivo that in EEC progenitors miR-7 is dramatically suppressed under dietary conditions that favor crypt division and suppress EEC abundance. We then demonstrate by functional assays in mouse enteroids that miR-7 exerts robust control of growth, as determined by budding (proxy for crypt division), EdU and PH3 staining, and likely regulates EEC abundance also. Finally, we show by single-cell RNA sequencing analysis that miR-7 regulates Xiap in progenitor/stem cells and we demonstrate in enteroids that the effects of miR-7 on mouse enteroid growth depend in part on Xiap and Egfr signaling.

conclusionsThis study demonstrates for the first time that EEC progenitor cell-enriched miR-7 is altered by dietary perturbations and that it regulates growth in enteroids via intact Xiap and Egfr signaling.

Indexed as

AnimalsCell LineageCell ProliferationCells, CulturedComputational BiologyEnteroendocrine CellsErbB ReceptorsFeeding BehaviorFemaleInhibitor of Apoptosis ProteinsIntestinal MucosaMaleMiceMice, TransgenicMicroRNAsModels, AnimalBirc4 protein, mouseEGFR protein, mouseErbB ReceptorsInhibitor of Apoptosis ProteinsMicroRNAsMIRN7 microRNA, mouseEnteroendocrine LineageEnteroidmiR-7ProliferationSmall Intestine

Identifiers

PMID31756561
PMCPMC7021555
OpenAlexW2990001782

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.