Evidence map›Paper›PMID 31756029›Full record

ArticleMolecular plant pathology2020

The effector GpRbp-1 of Globodera pallida targets a nuclear HECT E3 ubiquitin ligase to modulate gene expression in the host.

Amalia Diaz-Granados, Mark G Sterken, Hein Overmars, Roel Ariaans, Martijn Holterman, Somnath S Pokhare, Yulin Yuan, Rikus Pomp, Anna Finkers-Tomczak, Jan Roosien and 6 more

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Protein Dynamics in Plant Immunity: Insights into Plant-Pest Interactions.International journal of molecular sciences · 2024
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. The ubiquitin system affects agronomic plant traits.The Journal of biological chemistry · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 4 countries.

Amalia Diaz-GranadosLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Mark G SterkenLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Hein OvermarsLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Roel AriaansLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Martijn HoltermanLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Somnath S PokhareDepartment of Molecular Phytomedicine, University of Bonn, Bonn, Germany.
Yulin YuanDepartment of Plant Sciences, University of Idaho, Moscow, USA.
Rikus PompLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Anna Finkers-TomczakLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Jan RoosienLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Erik SlootwegLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Abdenaser ElashryDepartment of Molecular Phytomedicine, University of Bonn, Bonn, Germany.
Florian M W GrundlerDepartment of Molecular Phytomedicine, University of Bonn, Bonn, Germany.
Fangming XiaoDepartment of Plant Sciences, University of Idaho, Moscow, USA.ORCID 0000-0001-6044-9465
Aska GoverseLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Geert SmantLaboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands.
Wageningen University & Research · NLUniversity of Bonn · DEUniversity of Idaho · USKeyGene (Netherlands) · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant-parasitic nematodes secrete effectors that manipulate plant cell morphology and physiology to achieve host invasion and establish permanent feeding sites. Effectors from the highly expanded SPRYSEC (SPRY domain with a signal peptide for secretion) family in potato cyst nematodes have been implicated in activation and suppression of plant immunity, but the mechanisms underlying these activities remain largely unexplored. To study the host mechanisms used by SPRYSEC effectors, we identified plant targets of GpRbp-1 from the potato cyst nematode Globodera pallida. Here, we show that GpRbp-1 interacts in yeast and in planta with a functional potato homologue of the Homology to E6-AP C-Terminus (HECT)-type ubiquitin E3 ligase UPL3, which is located in the nucleus. Potato lines lacking StUPL3 are not available, but the Arabidopsis mutant upl3-5 displaying a reduced UPL3 expression showed a consistently small but not significant decrease in susceptibility to cyst nematodes. We observed a major impact on the root transcriptome by the lower levels of AtUPL3 in the upl3-5 mutant, but surprisingly only in association with infections by cyst nematodes. To our knowledge, this is the first example that a HECT-type ubiquitin E3 ligase is targeted by a pathogen effector and that a member of this class of proteins specifically regulates gene expression under biotic stress conditions. Together, our data suggest that GpRbp-1 targets a specific component of the plant ubiquitination machinery to manipulate the stress response in host cells.

Indexed as

Gene Expression Regulation, PlantAnimalsArabidopsisArabidopsis ProteinsB30.2-SPRY DomainHelminth ProteinsLigasesNuclear ProteinsSolanum tuberosumTylenchoideaUbiquitinationUbiquitin-Protein LigasesArabidopsis ProteinsHelminth ProteinsLigasesNuclear ProteinsUbiquitin-Protein LigasesUpl3 protein, ArabidopsisCyst nematodesGpRbp-1HECT E3 ligasenematode effectorsubiquitinationUPL3virulence/parasitism

Identifiers

PMID31756029
PMCPMC6913204
OpenAlexW2991039465

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.