Evidence map›Paper›PMID 31755685›Full record

ArticleACS chemical biology2020

Optimization of Ligands Using Focused DNA-Encoded Libraries To Develop a Selective, Cell-Permeable CBX8 Chromodomain Inhibitor.

Sijie Wang, Kyle E Denton, Kathryn F Hobbs, Tyler Weaver, James M B McFarlane, Katelyn E Connelly, Michael C Gignac, Natalia Milosevich, Fraser Hof, Irina Paci and 3 more

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 84 citations in OpenAlex.

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  18. Small-molecule discovery through DNA-encoded libraries.Nature reviews. Drug discovery · 2023
    Review
  19. Chemical tools targeting readers of lysine methylation.Current opinion in chemical biology · 2023
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Sijie WangDepartment of Medicinal Chemistry and Molecular Pharmacology, College of Pharmacy , Purdue University and Purdue University Center for Cancer Research , 575 Stadium Mall Drive , West Lafayette , Indiana 47906 , United States.
Kyle E DentonDepartment of Medicinal Chemistry and Molecular Pharmacology, College of Pharmacy , Purdue University and Purdue University Center for Cancer Research , 575 Stadium Mall Drive , West Lafayette , Indiana 47906 , United States.
Kathryn F HobbsDepartment of Biochemistry, Carver College of Medicine , University of Iowa , 51 Newton Road , Iowa City , Iowa 52242 , United States.
Tyler WeaverDepartment of Biochemistry, Carver College of Medicine , University of Iowa , 51 Newton Road , Iowa City , Iowa 52242 , United States.
James M B McFarlaneDepartment of Chemistry , University of Victoria , Victoria V8W 3V6 , Canada.ORCID 0000-0002-2505-1408
Katelyn E ConnellyDepartment of Medicinal Chemistry and Molecular Pharmacology, College of Pharmacy , Purdue University and Purdue University Center for Cancer Research , 575 Stadium Mall Drive , West Lafayette , Indiana 47906 , United States.
Michael C GignacDepartment of Chemistry , University of Victoria , Victoria V8W 3V6 , Canada.
Natalia MilosevichDepartment of Chemistry , University of Victoria , Victoria V8W 3V6 , Canada.
Fraser HofDepartment of Chemistry , University of Victoria , Victoria V8W 3V6 , Canada.ORCID 0000-0003-4658-9132
Irina PaciDepartment of Chemistry , University of Victoria , Victoria V8W 3V6 , Canada.
Catherine A MusselmanDepartment of Biochemistry, Carver College of Medicine , University of Iowa , 51 Newton Road , Iowa City , Iowa 52242 , United States.ORCID 0000-0002-8356-7971
Emily C DykhuizenDepartment of Medicinal Chemistry and Molecular Pharmacology, College of Pharmacy , Purdue University and Purdue University Center for Cancer Research , 575 Stadium Mall Drive , West Lafayette , Indiana 47906 , United States.
Casey J KrusemarkDepartment of Medicinal Chemistry and Molecular Pharmacology, College of Pharmacy , Purdue University and Purdue University Center for Cancer Research , 575 Stadium Mall Drive , West Lafayette , Indiana 47906 , United States.ORCID 0000-0003-2964-3520
Purdue University West Lafayette · USUniversity of Victoria · CAUniversity of Iowa · US

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI John Tesmer · 1985 to 2026
$43.4M
Indiana Clinical and Translational Sciences InstituteUL1TR001108 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI DENNE, SCOTT C., SHEKHAR, ANANTHA · 2013 to 2017
$23.3M
Molecular mechanisms of histone signaling in a chromatin relevant contextR35GM128705 · NIGMS · UNIVERSITY OF IOWA · PI Catherine Anne Musselman · 2018 to 2026
$3.8M
Harnessing the In Vitro Selection for Activity-based Proteomics and Chemical Probe DevelopmentR35GM128894 · NIGMS · PURDUE UNIVERSITY · PI Casey John Krusemark · 2018 to 2026
$3.2M
The tumor suppressive role of PBRM1, the bromodomain-containing subunit of the PBAF chromatin remodeling complexU01CA207532 · NCI · PURDUE UNIVERSITY · PI DYKHUIZEN, EMILY CARLA · 2017 to 2021
$1.7M
Differential Modulation of Cav1.2 and Cav1.3R21NS101535 · NINDS · PURDUE UNIVERSITY · PI HOCKERMAN, GREGORY HOWARD · 2017 to 2018
$409k
NCATS NIH HHS UL1 TR001108NCI NIH HHS P30 CA023168NCI NIH HHS U01 CA207532NIGMS NIH HHS R35 GM128705NIGMS NIH HHS R35 GM128894NINDS NIH HHS R21 NS101535
6 · The paper itself

Abstract

Polycomb repressive complex 1 (PRC1) is critical for mediating gene expression during development. Five chromobox (CBX) homolog proteins, CBX2, CBX4, CBX6, CBX7, and CBX8, are incorporated into PRC1 complexes, where they mediate targeting to trimethylated lysine 27 of histone H3 (H3K27me3)

Indexed as

Gene LibraryLigandsAmino Acid SequenceAntineoplastic AgentsCell Line, TumorCell Membrane PermeabilityCell ProliferationChromatinCloning, MolecularDNADrug DevelopmentEnzyme InhibitorsGene ExpressionHistonesHumansLigasesAntineoplastic AgentsCBX8 protein, humanChromatinDNAEnzyme InhibitorsHistonesLigandsLigasesLysinePolycomb Repressive Complex 1Recombinant Fusion Proteins

Identifiers

PMID31755685
PMCPMC7247616
OpenAlexW2989867137

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.