Evidence map›Paper›PMID 31754641›Full record

ArticleCommunications biology2019

Transcriptional programming and T cell receptor repertoires distinguish human lung and lymph node memory T cells.

Nathan Schoettler, Cara L Hrusch, Kelly M Blaine, Anne I Sperling, Carole Ober

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Shared loci but distinct variants underlie genetic architecture of allergic diseases.medRxiv : the preprint server for health sciences · 2025
    Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Frontiers in immunology · 2021
    Review
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Nathan Schoettler1Department of Medicine, The University of Chicago, Chicago, USA.ORCID 0000-0001-9851-6352
Cara L Hrusch1Department of Medicine, The University of Chicago, Chicago, USA.
Kelly M Blaine1Department of Medicine, The University of Chicago, Chicago, USA.
Anne I Sperling *1Department of Medicine, The University of Chicago, Chicago, USA.
Carole Ober *2Department of Human Genetics, The University of Chicago, Chicago, USA.
University of Chicago · US

Funding

RESEARCH TRAINING IN RESPIRATORY BIOLOGYT32HL007605 · NHLBI · UNIVERSITY OF CHICAGO · PI Yun Fang, Gokhan M. Mutlu · 1985 to 2026
$18.1M
Regulation and expression of HLA-G in asthmatic airwaysU19AI095230 · NIAID · UNIVERSITY OF CHICAGO · PI KRISHNAN, JERRY A. · 2011 to 2016
$10.5M
Mendelian Disease - Asthma Comorbidity to Find Subgroup-Specific Asthma GenesR01HL122712 · NHLBI · UNIVERSITY OF CHICAGO · PI OBER, CAROLE, RZHETSKY, ANDREY · 2015 to 2018
$3.1M
NHLBI NIH HHS R01 HL122712NHLBI NIH HHS T32 HL007605NIAID NIH HHS U19 AI095230
6 · The paper itself

Abstract

Antigen-specific memory T cells persist for years after exposure to a pathogen and provide effective recall responses. Many memory T cell subsets have been identified and differ in abundance throughout tissues. This study focused on CD4 and CD8 memory T cells from paired human lung and lung draining lymph node (LDLN) samples and identified substantial differences in the transcriptional landscape of these subsets, including higher expression of an array of innate immune receptors in lung T cells which were further validated by flow cytometry. Using T cell receptor analysis, we determined the clonal overlap between memory T cell subsets within the lung and within the LDLN, and this was greater than the clonal overlap observed between memory T cell subsets compared across tissues. Our results suggest that lung and LDLN memory T cells originate from different precursor pools, recognize distinct antigens and likely have separate roles in immune responses.

Indexed as

Genes, T-Cell ReceptorImmunologic MemoryTranscription, GeneticBiomarkersCellular ReprogrammingGene Expression ProfilingGene OntologyHumansImmunophenotypingLungLymph NodesReproducibility of ResultsT-Lymphocyte SubsetsV(D)J RecombinationBiomarkersImmunogeneticsImmunological memoryMucosal immunology

Identifiers

PMID31754641
PMCPMC6853923
OpenAlexW2985581919

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.