Evidence map›Paper›PMID 31754633›Full record

ArticleNPJ precision oncology2019

Characterization of Mucosal Dysbiosis of Early Colonic Neoplasia.

Bo-Young Hong, Takayasu Ideta, Bruno S Lemos, Yuichi Igarashi, Yuliana Tan, Michael DiSiena, Allen Mo, John W Birk, Faripour Forouhar, Thomas J Devers and 2 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in NPJ precision oncology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05195970 (Microbiota, Metabolites and Colon Neoplasia), which is not on this map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05195970 nacompletednot on this mapstarted 2022, after this paper: background citation

Microbiota, Metabolites and Colon Neoplasia

TypeinterventionalSponsorUConn HealthRan2022 to 2026Enrolled140ConditionsColorectal Cancer, Diet HabitArmsWalnuts
3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Observational
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. The Microbiome in Gastrointestinal Cancers.Gastroenterology clinics of North America · 2022
    Review
  13. Article
  14. Article
  15. The relationship between gastrointestinal cancers and the microbiota.The lancet. Gastroenterology & hepatology · 2021
    Review
  16. Safety assessment of titanium dioxide (E171) as a food additive.EFSA journal. European Food Safety Authority · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Observational
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Bo-Young Hong1The Jackson Laboratory for Genomic Medicine, Farmington, CT USA.
Takayasu Ideta2Department of Medicine, University of Connecticut Health, Farmington, CT USA.
Bruno S Lemos2Department of Medicine, University of Connecticut Health, Farmington, CT USA.
Yuichi Igarashi2Department of Medicine, University of Connecticut Health, Farmington, CT USA.
Yuliana Tan2Department of Medicine, University of Connecticut Health, Farmington, CT USA.
Michael DiSiena3Department of Gastroenterology and Hepatology, University of Connecticut Health, Farmington, CT USA.
Allen Mo2Department of Medicine, University of Connecticut Health, Farmington, CT USA.
John W Birk3Department of Gastroenterology and Hepatology, University of Connecticut Health, Farmington, CT USA.
Faripour Forouhar4Department of Pathology, University of Connecticut Health, Farmington, CT USA.
Thomas J Devers2Department of Medicine, University of Connecticut Health, Farmington, CT USA.
George M Weinstock1The Jackson Laboratory for Genomic Medicine, Farmington, CT USA.ORCID 0000-0002-2997-4592
Daniel W Rosenberg2Department of Medicine, University of Connecticut Health, Farmington, CT USA.
UConn Health · USJackson Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aberrant crypt foci (ACF) are the earliest morphologically identifiable lesions in the colon that can be detected by high-definition chromoendoscopy with contrast dye spray. Although frequently associated with synchronous adenomas, their role in colorectal tumor development, particularly in the proximal colon, is still not clear. The goal of this study was to evaluate the profile of colon-adherent bacteria associated with proximal ACF and to investigate their relationship to the presence and subtype of synchronous polyps present throughout the colon. Forty-five subjects undergoing a screening or surveillance colonoscopy were included in this retrospective study. Bacterial cells adherent to the epithelia of ACF and normal mucosal biopsies were visualized by in situ hybridization within confocal tissue sections. ACF showed significantly greater heterogeneity in their bacterial microbiome profiles compared with normal mucosa. One of the bacterial community structures we characterized was strongly correlated with the presence of synchronous polyps. Finally, using DNA mass spectrometry to evaluate a panel of colorectal cancer hotspot mutations present in the ACF, we found that three

Indexed as

Cancer preventionPredictive markers

Identifiers

PMID31754633
PMCPMC6856115
OpenAlexW2985060794

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.