Evidence map›Paper›PMID 31749705›Full record

ReviewFrontiers in pharmacology2019

Applications of Deep-Learning in Exploiting Large-Scale and Heterogeneous Compound Data in Industrial Pharmaceutical Research.

Laurianne David, Josep Arús-Pous, Johan Karlsson, Ola Engkvist, Esben Jannik Bjerrum, Thierry Kogej, Jan M Kriegl, Bernd Beck, Hongming Chen

Abstract readReview
In one paragraph

Review in Frontiers in pharmacology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

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  13. Comprehensive Survey of Recent Drug Discovery Using Deep Learning.International journal of molecular sciences · 2021
    Review
  14. Article
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  20. Deep Learning-Based HCS Image Analysis for the Enterprise.SLAS discovery : advancing life sciences R & D · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Laurianne DavidHit Discovery, Discovery Sciences, Biopharmaceutical R&D, AstraZeneca, Gothenburg, Sweden.
Josep Arús-PousHit Discovery, Discovery Sciences, Biopharmaceutical R&D, AstraZeneca, Gothenburg, Sweden.
Johan KarlssonQuantitative Biology, Discovery Sciences, Biopharmaceutical R&D, AstraZeneca, Gothenburg, Sweden.
Ola EngkvistHit Discovery, Discovery Sciences, Biopharmaceutical R&D, AstraZeneca, Gothenburg, Sweden.
Esben Jannik BjerrumHit Discovery, Discovery Sciences, Biopharmaceutical R&D, AstraZeneca, Gothenburg, Sweden.
Thierry KogejHit Discovery, Discovery Sciences, Biopharmaceutical R&D, AstraZeneca, Gothenburg, Sweden.
Jan M KrieglDepartment of Medicinal Chemistry, Boehringer Ingelheim Pharma GmbH & Co. KG, Biberach an der Riss, Germany.
Bernd BeckDepartment of Medicinal Chemistry, Boehringer Ingelheim Pharma GmbH & Co. KG, Biberach an der Riss, Germany.
Hongming ChenHit Discovery, Discovery Sciences, Biopharmaceutical R&D, AstraZeneca, Gothenburg, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, the development of high-throughput screening (HTS) technologies and their establishment in an industrialized environment have given scientists the possibility to test millions of molecules and profile them against a multitude of biological targets in a short period of time, generating data in a much faster pace and with a higher quality than before. Besides the structure activity data from traditional bioassays, more complex assays such as transcriptomics profiling or imaging have also been established as routine profiling experiments thanks to the advancement of Next Generation Sequencing or automated microscopy technologies. In industrial pharmaceutical research, these technologies are typically established in conjunction with automated platforms in order to enable efficient handling of screening collections of thousands to millions of compounds. To exploit the ever-growing amount of data that are generated by these approaches, computational techniques are constantly evolving. In this regard, artificial intelligence technologies such as deep learning and machine learning methods play a key role in cheminformatics and bio-image analytics fields to address activity prediction, scaffold hopping,

Indexed as

Artificial intelligenceChemogenomicsdeep learningLarge-scale datapharmaceutical industry

Identifiers

PMID31749705
PMCPMC6848277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.