Evidence map›Paper›PMID 31749445›Full record

ArticleeLife2019

The ribosomal P-stalk couples amino acid starvation to GCN2 activation in mammalian cells.

Heather P Harding, Adriana Ordonez, Felicity Allen, Leopold Parts, Alison J Inglis, Roger L Williams, David Ron

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 107 papers.

0numbers the graph read from it
0cells of the map it votes in
107citing papers in PubMed
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

107 citing papers in PubMed, 174 citations in OpenAlex.

  1. Article
  2. Review
  3. Substrate Binding Relieves Autoinhibition of the Mammalian GCN2 Kinase.bioRxiv : the preprint server for biology · 2026
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Quality control and signaling pathways at stalled ribosomes.Experimental & molecular medicine · 2026
    Review
  9. Review
  10. GCN2 regulates paclitaxel-induced neuropathic pain.British journal of pharmacology · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Structure of a Gcn2 dimer in complex with the large 60S ribosomal subunit.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Article
  18. Article
  19. Article
  20. Article

47 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Heather P HardingCambridge Institute for Medical Research, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0002-7359-7974
Adriana OrdonezCambridge Institute for Medical Research, University of Cambridge, Cambridge, United Kingdom.
Felicity AllenWellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom.
Leopold PartsWellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, United Kingdom.
Alison J InglisMedical Research Council Laboratory of Molecular Biology, Cambridge, United Kingdom.
Roger L WilliamsMedical Research Council Laboratory of Molecular Biology, Cambridge, United Kingdom.ORCID 0000-0001-7754-4207
David RonCambridge Institute for Medical Research, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0002-3014-5636
University of Cambridge · GBMRC Laboratory of Molecular Biology · GBWellcome Sanger Institute · GB

Funding

Cancer Research UK C14801/A21211Medical Research Council MC_U105184308Wellcome Wellcome 100140Wellcome Wellcome 200848/Z/16/ZWellcome Trust
6 · The paper itself

Abstract

The eukaryotic translation initiation factor 2α (eIF2α) kinase GCN2 is activated by amino acid starvation to elicit a rectifying physiological program known as the Integrated Stress Response (ISR). A role for uncharged tRNAs as activating ligands of yeast GCN2 is supported experimentally. However, mouse GCN2 activation has recently been observed in circumstances associated with ribosome stalling with no global increase in uncharged tRNAs. We report on a mammalian CHO cell-based CRISPR-Cas9 mutagenesis screen for genes that contribute to ISR activation by amino acid starvation. Disruption of genes encoding components of the ribosome P-stalk, uL10 and P1, selectively attenuated GCN2-mediated ISR activation by amino acid starvation or interference with tRNA charging without affecting the endoplasmic reticulum unfolded protein stress-induced ISR, mediated by the related eIF2α kinase PERK. Wildtype ribosomes isolated from CHO cells, but not those with P-stalk lesions, stimulated GCN2-dependent eIF2α phosphorylation in vitro. These observations support a model whereby lack of a cognate charged tRNA exposes a latent capacity of the ribosome P-stalk to activate GCN2 in cells and help explain the emerging link between ribosome stalling and ISR activation.

Indexed as

Amino AcidsAnimalsCHO CellsCricetulusCRISPR-Cas SystemseIF-2 KinaseEndoplasmic ReticulumGene Expression Regulation, EnzymologicHeLa CellsHumansKineticsLigandsMiceModels, MolecularMutagenesisPhosphorylationAmino AcidsEif2ak4 protein, mouseeIF-2 KinaseLigandsProtein Serine-Threonine KinasesRNA, Transfercell biologyCHOGCN2geneticsgenomicsintegrated stress responsep1p2P-stalkribosome stallingul10

Identifiers

PMID31749445
PMCPMC6919976
OpenAlexW2990720509

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.