Evidence map›Paper›PMID 31749298›Full record

ArticleBJOG : an international journal of obstetrics and gynaecology2020

The vaginal metabolome and microbiota of cervical HPV-positive and HPV-negative women: a cross-sectional analysis.

J C Borgogna, M D Shardell, E K Santori, T M Nelson, J M Rath, E D Glover, J Ravel, P E Gravitt, C J Yeoman, R M Brotman

Open access · bronzeAbstract read
In one paragraph

Article in BJOG : an international journal of obstetrics and gynaecology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed, 2 pooled it
9.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 2 syntheses or guidelines pooled it, 158 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

J C BorgognaDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT, USA.
M D ShardellInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.
E K SantoriDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT, USA.
T M NelsonDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT, USA.
J M RathDepartment of Behavioral and Community Health, University of Maryland, School of Public Health, College Park, MD, USA.
E D GloverDepartment of Behavioral and Community Health, University of Maryland, School of Public Health, College Park, MD, USA.
J RavelInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.
P E GravittDepartment of Global Health, George Washington University, Washington, DC, USA.
C J YeomanDepartment of Microbiology and Immunology, Montana State University, Bozeman, MT, USA.
R M BrotmanInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.ORCID 0000-0001-8762-6214
Montana State University · USUniversity of Maryland, Baltimore · USAmerican Legacy Foundation · USGeorge Washington University · USUniversity of Maryland, College Park · US

Funding

Longitudinal Study of the Vaginal Microbiome Prior To Incident STIR01AI116799 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI BROTMAN, REBECCA M. · 2015 to 2019
$3.5M
National Institute of Allergy and Infectious Diseases R01-AI116799NIAID NIH HHS R01 AI116799
6 · The paper itself

Abstract

objectiveCharacterise the vaginal metabolome of cervical HPV-infected and uninfected women.

designCross-sectional.

settingThe Center for Health Behavior Research at the University of Maryland School of Public Health. SAMPLE: Thirty-nine participants, 13 categorised as HPV-negative and 26 as HPV-positive (any genotype; HPV

methodSelf-collected mid-vaginal swabs were profiled for bacterial composition by 16S rRNA gene amplicon sequencing, metabolites by both gas and liquid chromatography mass spectrometry, and 37 types of HPV DNA.

main outcome measuresMetabolite abundances.

resultsVaginal microbiota clustered into Community State Type (CST) I (Lactobacillus crispatus-dominated), CST III (Lactobacillus iners-dominated), and CST IV (low-Lactobacillus, 'molecular-BV'). HPV

conclusionsThe vaginal metabolome of HPV TWEETABLE ABSTRACT: Metabolomics study: Vaginal microenvironment of HPV

Indexed as

MetabolomeMicrobiotaAdultCross-Sectional StudiesFemaleHigh-Throughput Nucleotide SequencingHumansLactobacillusPapillomavirus InfectionsRNA, Ribosomal, 16SVaginaRNA, Ribosomal, 16S16S rRNA gene amplicon sequencinghuman papillomavirusvaginal metabolomevaginal microbiota

Identifiers

PMID31749298
PMCPMC6982399
OpenAlexW2990640021

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.