Evidence map›Paper›PMID 31748968›Full record

ArticleHuman genetics2019

Compound heterozygous mutations in SNAP29 is associated with Pelizaeus-Merzbacher-like disorder (PMLD).

Lorida Llaci, Keri Ramsey, Newell Belnap, Ana M Claasen, Chris D Balak, Szabolcs Szelinger, Wayne M Jepsen, Ashley L Siniard, Ryan Richholt, Tyler Izat and 8 more

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In one paragraph

Article in Human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 1 country.

Lorida LlaciCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Keri RamseyCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Newell BelnapCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Ana M ClaasenCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Chris D BalakCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Szabolcs SzelingerCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Wayne M JepsenCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Ashley L SiniardCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Ryan RichholtCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Tyler IzatCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Marcus NaymikCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Matt De BothCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Ignazio S PirasCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
David W CraigCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Matthew J HuentelmanCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Vinodh NarayananCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA.
Isabelle SchrauwenCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA. isabelle.schrauwen@gmail.com.
Sampathkumar RangasamyCenter for Rare Childhood Disorders, Translational Genomics Research Institute, Phoenix, AZ, USA. srangasamy@tgen.org.ORCID http://orcid.org/0000-0003-2151-9162
Translational Genomics Research Institute · USUniversity of Southern California · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pelizaeus-Merzbacher-like disease (PMLD) is an autosomal recessive hypomyelinating leukodystrophy, which is clinically and radiologically similar to X-linked Pelizaeus-Merzbacher disease (PMD). PMLD is characterized by early-onset nystagmus, delayed development (motor delay, speech delay and dysarthria), dystonia, hypotonia typically evolving into spasticity, ataxia, seizures, optic atrophy, and diffuse leukodystrophy on magnetic resonance imaging (MRI). We identified a 12-year-old Caucasian/Hispanic male with the classical clinical characteristics of PMLD with lack of myelination of the subcortical white matter, and absence of the splenium of corpus callosum. Exome sequencing in the trio revealed novel compound heterozygous pathogenic mutations in SNAP29 (p.Leu119AlafsX15, c.354DupG and p.0?, c.2T > C). Quantitative analysis of the patient's blood cells through RNA sequencing identified a significant decrease in SNAP29 mRNA expression, while western blot analysis on fibroblast cells revealed a lack of protein expression compared to parental and control cells. Mutations in SNAP29 have previously been associated with cerebral dysgenesis, neuropathy, ichthyosis, and keratoderma (CEDNIK) syndrome. Typical skin features described in CEDNIK syndrome, such as generalized ichthyosis and keratoderma, were absent in our patient. Moreover, the early onset nystagmus and leukodystrophy were consistent with a PMLD diagnosis. These findings suggest that loss of SNAP29 function, which was previously associated with CEDNIK syndrome, is also associated with PMLD. Overall, our study expands the genetic spectrum of PMLD.

Indexed as

HeterozygoteMutationChildExome SequencingHereditary Central Nervous System Demyelinating DiseasesHumansMalePrognosisQb-SNARE ProteinsQc-SNARE ProteinsQb-SNARE ProteinsQc-SNARE ProteinsSNAP29 protein, human

Identifiers

PMID31748968
OpenAlexW2991646286

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.