Evidence map›Paper›PMID 31748512›Full record

ArticleNature communications2019

In vivo clonal expansion and phenotypes of hypocretin-specific CD4

Wei Jiang, James R Birtley, Shu-Chen Hung, Weiqi Wang, Shin-Heng Chiou, Claudia Macaubas, Birgitte Kornum, Lu Tian, Huang Huang, Lital Adler and 8 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 62 citations in OpenAlex.

  1. Trial
  2. Article
  3. Increased Numbers of CD4Annals of neurology · 2026
    Article
  4. Review
  5. HLA-DQB1*03:01 strongly affects age of onset of type 1 narcolepsy independently of DQA1 and ethnicity.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. The immunopathogenesis of narcolepsy type 1.Nature reviews. Immunology · 2024
    Review
  12. Review
  13. Article
  14. Epigenetic silencing of selected hypothalamic neuropeptides in narcolepsy with cataplexy.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Article
  16. Review
  17. Review
  18. Characterization of T cell receptors reactive to HCRTProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 4 countries.

Wei JiangDepartment of Pediatrics-Human Gene Therapy, Stanford University School of medicine, Stanford, CA, 94305, USA. wjiang6@stanford.edu.ORCID http://orcid.org/0000-0001-7883-8418
James R BirtleyDepartment of Pathology, University of Massachusetts Medical School, Worcester, MA, 01655, USA.ORCID http://orcid.org/0000-0002-8159-4060
Shu-Chen HungDepartment of Pediatrics-Human Gene Therapy, Stanford University School of medicine, Stanford, CA, 94305, USA.
Weiqi WangHuman Immune Monitoring Center, Stanford University School of Medicine, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0002-4936-0977
Shin-Heng ChiouInstitute for Immunity, Transplantation and Infection, Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, 94305, USA.
Claudia MacaubasDepartment of Pediatrics-Human Gene Therapy, Stanford University School of medicine, Stanford, CA, 94305, USA.
Birgitte KornumDanish Center for Sleep Medicine, Department of Clinical Neurophysiology, Rigshospitalet, 2600, Glostrup, Denmark.
Lu TianDepartment of Biomedical Data Science, Stanford University School of Medicine, Stanford, CA, 94305, USA.
Huang HuangInstitute for Immunity, Transplantation and Infection, Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0002-8377-4823
Lital AdlerDepartment of Pediatrics-Human Gene Therapy, Stanford University School of medicine, Stanford, CA, 94305, USA.
Grant WeaverDepartment of Pathology, University of Massachusetts Medical School, Worcester, MA, 01655, USA.ORCID http://orcid.org/0000-0003-1151-2944
Liying LuDepartment of Pathology, University of Massachusetts Medical School, Worcester, MA, 01655, USA.
Alexandra Ilstad-MinnihanDepartment of Pediatrics-Human Gene Therapy, Stanford University School of medicine, Stanford, CA, 94305, USA.
Sriram SomasundaramDepartment of Pediatrics-Human Gene Therapy, Stanford University School of medicine, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0001-7522-914X
Sashi AyyangarDepartment of Pediatrics-Human Gene Therapy, Stanford University School of medicine, Stanford, CA, 94305, USA.
Mark M DavisStanford Immunology, Stanford University School of Medicine, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0001-6868-657X
Lawrence J SternDepartment of Pathology, University of Massachusetts Medical School, Worcester, MA, 01655, USA.ORCID http://orcid.org/0000-0001-9870-8557
Elizabeth D MellinsDepartment of Pediatrics-Human Gene Therapy, Stanford University School of medicine, Stanford, CA, 94305, USA. mellins@stanford.edu.ORCID http://orcid.org/0000-0003-2577-139X
Stanford University · USUniversity of Massachusetts Chan Medical School · USStanford Medicine · USHoward Hughes Medical Institute · USRigshospitalet · DKWeizmann Institute of Science · IL

Funding

Stanford Center for Clinical & Translational Education and Research (Spectrum)UL1TR003142 · NCATS · STANFORD UNIVERSITY · PI O'HARA, RUTH M · 2019 to 2023
$45.0M
MOLECULAR &CELLULAR IMMUNOBIOLOGYT32AI007290 · NIAID · STANFORD UNIVERSITY · PI Sean Curtis Bendall, Olivia M Martinez · 1985 to 2026
$27.0M
Stanford Center for Clinical and Translational Education and Research (SCCTER)UL1UL1TR000093 · NCATS · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 2012 to 2013
$6.5M
Structure and Function of MHC ProteinsR37AI038996 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI STERN, LAWRENCE J. · 2008 to 2017
$4.1M
Structure and Function of Class II MHC ProteinsR01AI038996 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI STERN, LAWRENCE J · 1996 to 2006
$1.6M
Structure and Function of Class II MHC ProteinsR56AI038996 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI STERN, LAWRENCE J · 2007 to 2007
$324k
NCATS NIH HHS UL1 TR000093NCATS NIH HHS UL1 TR003142NIAID NIH HHS R01 AI038996NIAID NIH HHS R37 AI038996NIAID NIH HHS R56 AI038996NIAID NIH HHS T32 AI007290
6 · The paper itself

Abstract

Individuals with narcolepsy suffer from abnormal sleep patterns due to loss of neurons that uniquely supply hypocretin (HCRT). Previous studies found associations of narcolepsy with the human leukocyte antigen (HLA)-DQ6 allele and T-cell receptor α (TRA) J24 gene segment and also suggested that in vitro-stimulated T cells can target HCRT. Here, we present evidence of in vivo expansion of DQ6-HCRT tetramer

Indexed as

AnimalsAutoimmunityCase-Control StudiesCD4-Positive T-LymphocytesCell ProliferationCrystallography, X-RayDrosophilaHLA-DQ AntigensHumansImmunoglobulin Joining RegionNarcolepsyOrexinsPeripheral TolerancePhenotypeReceptors, Antigen, T-Cell, alpha-betaHCRT protein, humanHLA-DQ6 antigenHLA-DQ AntigensImmunoglobulin Joining RegionOrexinsReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID31748512
PMCPMC6868281
OpenAlexW2989925705

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.