Evidence map›Paper›PMID 31748509›Full record

ArticleScientific reports2019

Discovery of novel potential selective HDAC8 inhibitors by combine ligand-based, structure-based virtual screening and in-vitro biological evaluation.

Sudhan Debnath, Tanusree Debnath, Samhita Bhaumik, Swapan Majumdar, Arunasree M Kalle, Vema Aparna

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Sudhan DebnathDepartment of Chemistry, MBB College, Agartala, Tripura, 799004, India. bcsdebnath@gmail.com.
Tanusree DebnathDepartment of Chemistry, MBB College, Agartala, Tripura, 799004, India.
Samhita BhaumikDepartment of Chemistry, Women's College, Agartala, Tripura, 799001, India.
Swapan MajumdarDepartment of Chemistry, Tripura University, Suryamaninagar, Agartala, Tripura, 799022, India.
Arunasree M KalleDepartment of Animal Biology, School of Life Sciences, University of Hyderabad, Hyderabad, TS, 500046, India.ORCID http://orcid.org/0000-0002-5948-2337
Vema AparnaSree Chaitanya Institute of Pharmaceutical Sciences, Karimnagar, 505 527, Andhra Pradesh, India.
Maharaja Bir Bikram University · INNational Institute of Technology Agartala · INTripura University · INUniversity of Hyderabad · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neuroblastoma is the most common extracranial solid tumor found in children and survival rate is extremely meager. HDAC8, a class I zinc-dependent enzyme, is a potential drug target for treatment of neuroblastoma and T cell lymphoma. Most of the HDAC8 inhibitors discovered till date contains a hydroxamic acid group which acts as a zinc binding group. The high binding affinity to the zinc and other ions results in adverse effects. Also, the non-selective inhibition of HDACs cause a variety of side effects. The objective of this is to identify structurally diverse, non-hydroxamate, novel, potential and selective HDAC8 inhibitors. A number of five featured pharmacophore hypotheses were generated using 32 known selective HDAC8 inhibitors. The hypotheses ADDRR.4 were selected for building 3D QSAR model. This model has an excellent correlation coefficient and good predictive ability, which was employed for virtual screening of Phase database containing 4.3 × 10

Indexed as

Drug DesignHistone Deacetylase 6Histone Deacetylase InhibitorsHistone DeacetylasesHumansLigandsMolecular Docking SimulationMolecular Dynamics SimulationMolecular StructureNeuroblastomaQuantitative Structure-Activity RelationshipRepressor ProteinsHDAC8 protein, humanHistone Deacetylase 6Histone Deacetylase InhibitorsHistone DeacetylasesLigandsRepressor Proteins

Identifiers

PMID31748509
PMCPMC6868012
OpenAlexW2991486293

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.