Evidence map›Paper›PMID 31748417›Full record

ArticlePlant physiology2020

Regulation of Sugar and Storage Oil Metabolism by Phytochrome during De-etiolation.

Toshiaki Kozuka, Yuji Sawada, Hiroyuki Imai, Masatake Kanai, Masami Yokota Hirai, Shoji Mano, Matsuo Uemura, Mikio Nishimura, Makoto Kusaba, Akira Nagatani

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
7.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 34 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Toshiaki KozukaGraduate School of Integrated Science for Life, Hiroshima University, Higashi-Hiroshima, Hiroshima 739-8526 Japan.
Yuji SawadaRIKEN Center for Sustainable Resource Science, RIKEN, Yokohama, Kanagawa 230-0045, Japan.ORCID 0000-0002-7427-1749
Hiroyuki ImaiUnited Graduate School of Agricultural Science, Iwate University, Morioka, Iwate 020-8550, Japan.
Masatake KanaiDepartment of Cell Biology, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Masami Yokota HiraiRIKEN Center for Sustainable Resource Science, RIKEN, Yokohama, Kanagawa 230-0045, Japan.ORCID 0000-0003-0802-6208
Shoji ManoDepartment of Cell Biology, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.ORCID 0000-0003-1323-3308
Matsuo UemuraUnited Graduate School of Agricultural Science, Iwate University, Morioka, Iwate 020-8550, Japan.ORCID 0000-0003-0436-2976
Mikio NishimuraDepartment of Cell Biology, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.
Makoto KusabaGraduate School of Integrated Science for Life, Hiroshima University, Higashi-Hiroshima, Hiroshima 739-8526 Japan.ORCID 0000-0003-1200-7640
Akira NagataniGraduate School of Science, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan nagatani@physiol.bot.kyoto-u.ac.jp.ORCID 0000-0002-4284-3140
National Institute for Basic Biology · JPHiroshima University · JPIwate University · JPRIKEN Center for Sustainable Resource Science · JPKyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Exposure of dark-grown (etiolated) seedlings to light induces the heterotrophic-to-photoautotrophic transition (de-etiolation) processes, including the formation of photosynthetic machinery in the chloroplast and cotyledon expansion. Phytochrome is a red (R)/far-red (FR) light photoreceptor that is involved in the various aspects of de-etiolation. However, how phytochrome regulates metabolic dynamics in response to light stimulus has remained largely unknown. In this study, to elucidate the involvement of phytochrome in the metabolic response during de-etiolation, we performed widely targeted metabolomics in Arabidopsis (

Indexed as

ArabidopsisArabidopsis ProteinsChromatography, High Pressure LiquidCotyledonEtiolationGlyoxylatesGlyoxysomesLightLipid DropletsMetabolomeMetabolomicsMicroscopy, Electron, TransmissionMutationPhytochrome APhytochrome BSeedlingsArabidopsis ProteinsGlyoxylatesglyoxylic acidPhytochrome APhytochrome BSugarsTriglycerides

Identifiers

PMID31748417
PMCPMC6997681
OpenAlexW2989928203

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.