Evidence map›Paper›PMID 31748205›Full record

ArticleDevelopment (Cambridge, England)2019

Use of hPSC-derived 3D organoids and mouse genetics to define the roles of YAP in the development of the esophagus.

Dominique D Bailey, Yongchun Zhang, Benjamin J van Soldt, Ming Jiang, Supriya Suresh, Hiroshi Nakagawa, Anil K Rustgi, Seema S Aceves, Wellington V Cardoso, Jianwen Que

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Epithelial architecture and signaling activity in the adult human esophagus.Frontiers in cell and developmental biology · 2025
    Review
  3. Amniotic fluid modifies esophageal epithelium differentiation and inflammatory responses.American journal of physiology. Gastrointestinal and liver physiology · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Control of stem cell renewal and fate by YAP and TAZ.Nature reviews. Molecular cell biology · 2023
    Review
  11. Article
  12. Article
  13. Review
  14. Mapping the adult human esophagus in vivo and in vitro.Development (Cambridge, England) · 2022
    Article
  15. Review
  16. Review
  17. Review
  18. Review
  19. Context-dependent roles of YAP/TAZ in stem cell fates and cancer.Cellular and molecular life sciences : CMLS · 2021
    Review
  20. Self-organization of organoids from endoderm-derived cells.Journal of molecular medicine (Berlin, Germany) · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Dominique D BaileyDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University Medical Center, New York, NY 10032, USA.
Yongchun ZhangDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University Medical Center, New York, NY 10032, USA.
Benjamin J van SoldtColumbia Center for Human Development, Columbia University Medical Center, New York, NY 10032, USA.
Ming JiangDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University Medical Center, New York, NY 10032, USA.
Supriya SureshDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University Medical Center, New York, NY 10032, USA.
Hiroshi NakagawaDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University Medical Center, New York, NY 10032, USA.
Anil K RustgiDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University Medical Center, New York, NY 10032, USA.
Seema S AcevesDivision of Allergy Immunology, Rady Children's Hospital San Diego, University of California, San Diego, CA 92093, USA.ORCID 0000-0002-2622-7081
Wellington V CardosoColumbia Center for Human Development, Columbia University Medical Center, New York, NY 10032, USA.
Jianwen QueDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University Medical Center, New York, NY 10032, USA jq2240@cumc.columbia.edu.ORCID 0000-0002-6540-6701
Columbia University Irving Medical Center · USRady Children's Hospital-San Diego · US

Funding

TRAINING (CAREER DEVELOPMENT) COMPONENTU54AI117804 · NIAID · CINCINNATI CHILDRENS HOSP MED CTR · PI GLENN T FURUTA, Marc E. Rothenberg · 2014 to 2026
$18.5M
Multidisciplinary Training in Translational Gastrointestinal and Liver ResearchT32DK083256 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Timothy Cragin Wang · 2009 to 2026
$5.5M
Basal Progenitor Cells and Eosinophilic EsophagitisR01DK100342 · NIDDK · UNIVERSITY OF ROCHESTER · PI QUE, JIANWEN · 2014 to 2022
$3.3M
Nkx2.1+ Lung-Derived Cells in Asthma and Eosinophilic Esophagitis (EoE)R01HL132996 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI QUE, JIANWEN · 2017 to 2020
$2.0M
Signaling Mechanisms Promoting Barrett’s MetaplasiaR01DK120650 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI QUE, JIANWEN · 2019 to 2022
$1.8M
Barrett's esophagus and progenitor cells at the squamous-columnar junctionR01DK113144 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI QUE, JIANWEN · 2017 to 2020
$1.4M
BD Biosciences InfluxS10OD020056 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SNOECK, HANS-WILLEM E · 2015 to 2015
$600k
NHLBI NIH HHS R01 HL132996NIAID NIH HHS U54 AI117804NIDDK NIH HHS R01 DK100342NIDDK NIH HHS R01 DK113144NIDDK NIH HHS R01 DK120650NIDDK NIH HHS T32 DK083256NIH HHS S10 OD020056
6 · The paper itself

Abstract

Balanced progenitor activities are crucial for the development and maintenance of high turn-over organs such as the esophagus. However, the molecular mechanisms regulating these progenitor activities in the esophagus remain to be elucidated. Here, we demonstrated that Yap is required for the proliferation of esophageal progenitor cells (EPCs) in the developing murine esophagus. We found that Yap deficiency reduces EPC proliferation and stratification whereas persistent Yap activation increases cell proliferation and causes aberrant stratification of the developing esophagus. We further demonstrated that the role of YAP signaling is conserved in the developing human esophagus by utilizing 3D human pluripotent stem cell (hPSC)-derived esophageal organoid culture. Taken together, our studies combining loss/gain-of-function murine models and hPSC differentiation support a key role for YAP in the self-renewal of EPCs and stratification of the esophageal epithelium.

Indexed as

Models, BiologicalAdaptor Proteins, Signal TransducingAnimalsCell Cycle ProteinsEsophagusHumansMiceOrganoidsPluripotent Stem CellsTranscription FactorsYAP-Signaling ProteinsAdaptor Proteins, Signal TransducingCell Cycle ProteinsTranscription FactorsYAP1 protein, humanYap1 protein, mouseYAP-Signaling Proteins3D organoidsEsophagusHippo pathwayHuman pluripotent stem cellsProgenitor cellsYAP

Identifiers

PMID31748205
PMCPMC6918786
OpenAlexW2991499113

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.