Evidence map›Paper›PMID 31747970›Full record

ArticleParasites & vectors2019

Genetic diversity, natural selection and haplotype grouping of Plasmodium vivax Duffy-binding protein genes from eastern and western Myanmar borders.

Yubing Hu, Lin Wang, Huguette Gaelle Ngassa Mbenda, Myat Thu Soe, Chunyun Yu, Hui Feng, Myat Phone Kyaw, Liwang Cui, Xiaotong Zhu, Yaming Cao

Abstract read
In one paragraph

Article in Parasites & vectors, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Genetic diversity and molecular evolution of Plasmodium vivax Duffy Binding Protein and Merozoite Surface Protein-1 in northwestern Thailand.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2023
    Article
  3. Article
  4. Multi-Omics Advancements towardsDiagnostics (Basel, Switzerland) · 2021
    Review
  5. Article
  6. Genetic Diversity and Natural Selection ofFrontiers in microbiology · 2021
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yubing HuDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Lin WangDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Huguette Gaelle Ngassa MbendaDepartment of Internal Medicine, Morsani College of Medicine, University of South Florida, 3720 Spectrum Boulevard, Suite 304, Tampa, FL, 33612, USA.
Myat Thu SoeMyanmar Health Network Organization, Yangon, Myanmar.
Chunyun YuDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Hui FengDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China.
Myat Phone KyawMyanmar Health Network Organization, Yangon, Myanmar.
Liwang CuiDepartment of Internal Medicine, Morsani College of Medicine, University of South Florida, 3720 Spectrum Boulevard, Suite 304, Tampa, FL, 33612, USA.
Xiaotong ZhuDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China. xtzhu@cmu.edu.cn.
Yaming CaoDepartment of Immunology, College of Basic Medical Science, China Medical University, Shenyang, 110122, Liaoning, China. ymcao@cmu.edu.cn.

Funding

Southeast Asia Malaria Research CenterU19AI089672 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI CUI, LIWANG · 2010 to 2023
$28.9M
National Institute of Allergy and Infectious Diseases U19AI089672NIAID NIH HHS U19 AI089672
6 · The paper itself

Abstract

backgroundMerozoite proteins of the malaria parasites involved in the invasion of red blood cells are selected by host immunity and their diversity is greatly influenced by changes in malaria epidemiology. In the Greater Mekong Subregion (GMS), malaria transmission is concentrated along the international borders and there have been major changes in malaria epidemiology with Plasmodium vivax becoming the dominant species in many regions. Here, we aimed to evaluate the genetic diversity of P. vivax Duffy-binding protein gene domain II (pvdbp-II) in isolates from the eastern and western borders of Myanmar, and compared it with that from global P. vivax populations.

methodspvdbp-II sequences were obtained from 85 and 82 clinical P. vivax isolates from the eastern and western Myanmar borders, respectively. In addition, 504 pvdbp-II sequences from nine P. vivax populations of the world were retrieved from GenBank and used for comparative analysis of genetic diversity, recombination and population structure of the parasite population.

resultsThe nucleotide diversity of the pvdbp-II sequences from the Myanmar border parasite isolates was not uniform, with the highest diversity located between nucleotides 1078 and 1332. Western Myanmar isolates had a unique R391C mutation. Evidence of positive natural selection was detected in pvdbp-II gene in P. vivax isolates from the eastern Myanmar area. P. vivax parasite populations in the GMS, including those from the eastern, western, and central Myanmar as well as Thailand showed low-level genetic differentiation (F

conclusionsThe pvdbp-II gene is genetically diverse in the eastern and western Myanmar border P. vivax populations. Positive natural selection and recombination occurred in pvdbp-II gene. Low-level genetic differentiation was identified, suggesting extensive gene flow of the P. vivax populations in the GMS. These results can help understand the evolution of the P. vivax populations in the course of regional malaria elimination and guide the design of PvDBP-II-based vaccine.

Indexed as

Genetic VariationHaplotypesSelection, GeneticAntigens, ProtozoanCluster AnalysisHumansMalaria, VivaxMyanmarPlasmodium vivaxProtozoan ProteinsReceptors, Cell SurfaceSequence Analysis, DNAThailandAntigens, ProtozoanDuffy antigen binding protein, PlasmodiumProtozoan ProteinsReceptors, Cell SurfaceDuffy-binding proteinGenetic diversityMyanmar borderPlasmodium vivax

Identifiers

PMID31747970
PMCPMC6864963

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.