Evidence map›Paper›PMID 31747926›Full record

ArticleBMC biotechnology2019

Identification and characterization of the GmRD26 soybean promoter in response to abiotic stresses: potential tool for biotechnological application.

Elinea O Freitas, Bruno P Melo, Isabela T Lourenço-Tessutti, Fabrício B M Arraes, Regina M Amorim, Maria E Lisei-de-Sá, Julia A Costa, Ana G B Leite, Muhammad Faheem, Márcio A Ferreira and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
5.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
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  4. Functional Characterization ofPlants (Basel, Switzerland) · 2023
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  5. Article
  6. Isolation and characterization of drought and ABA responsive promoter of a transcription factor encoding gene from rice.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  7. Article
  8. Article
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  11. The soybean (Plant direct · 2021
    Article
  12. Characterization ofInternational journal of molecular sciences · 2020
    Article
  13. Frontiers in plant science · 2020
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Elinea O FreitasEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Bruno P MeloEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Isabela T Lourenço-TessuttiEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Fabrício B M ArraesEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Regina M AmorimEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Maria E Lisei-de-SáEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.ORCID 0000-0002-2710-1368
Julia A CostaEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Ana G B LeiteEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Muhammad FaheemEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Márcio A FerreiraFederal University of Rio de Janeiro, Rio Janeiro, RJ, Brazil.
Carolina V MorganteEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil.
Elizabeth P B FontesFederal University of Viçosa, Viçosa, MG, Brazil.
Maria F Grossi-de-SaEmbrapa Genetic Resources and Biotechnology, Brasília, DF, Brazil. mariafatimagrossidesa@gmail.com.
Brazilian Agricultural Research Corporation · BRUniversidade de Brasília · BRUniversidade Federal de Viçosa · BRUniversidade Federal do Rio de Janeiro · BRUniversidade Federal do Rio Grande do Sul · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDrought is one of the most harmful abiotic stresses for plants, leading to reduced productivity of several economically important crops and, consequently, considerable losses in the agricultural sector. When plants are exposed to stressful conditions, such as drought and high salinity, they modulate the expression of genes that lead to developmental, biochemical, and physiological changes, which help to overcome the deleterious effects of adverse circumstances. Thus, the search for new specific gene promoter sequences has proved to be a powerful biotechnological strategy to control the expression of key genes involved in water deprivation or multiple stress responses.

resultsThis study aimed to identify and characterize the GmRD26 promoter (pGmRD26), which is involved in the regulation of plant responses to drought stress. The expression profile of the GmRD26 gene was investigated by qRT-PCR under normal and stress conditions in Williams 82, BR16 and Embrapa48 soybean-cultivars. Our data confirm that GmRD26 is induced under water deficit with different induction folds between analyzed cultivars, which display different genetic background and physiological behaviour under drought. The characterization of the GmRD26 promoter was performed under simulated stress conditions with abscisic acid (ABA), polyethylene glycol (PEG) and drought (air dry) on A. thaliana plants containing the complete construct of pGmRD26::GUS (2.054 bp) and two promoter modules, pGmRD26A::GUS (909 pb) and pGmRD26B::GUS (435 bp), controlling the expression of the β-glucuronidase (uidA) gene. Analysis of GUS activity has demonstrated that pGmRD26 and pGmRD26A induce strong reporter gene expression, as the pAtRD29 positive control promoter under ABA and PEG treatment.

conclusionsThe full-length promoter pGmRD26 and the pGmRD26A module provides an improved uidA transcription capacity when compared with the other promoter module, especially in response to polyethylene glycol and drought treatments. These data indicate that pGmRD26A may become a promising biotechnological asset with potential use in the development of modified drought-tolerant plants or other plants designed for stress responses.

Indexed as

Abscisic AcidBiotechnologyDroughtsGene Expression Regulation, PlantGlycine maxPromoter Regions, GeneticStress, PhysiologicalAbscisic AcidAbscisic acidDrought toleranceGene-promoter characterizationPromoter modules analysisStress-responsive promoter

Identifiers

PMID31747926
PMCPMC6865010
OpenAlexW2991637128

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.