Evidence map›Paper›PMID 31743939›Full record

ArticleInvestigative ophthalmology & visual science2019

Homozygous Variant in ARL3 Causes Autosomal Recessive Cone Rod Dystrophy.

Shakeel A Sheikh, Robert A Sisk, Cara R Schiavon, Yar M Waryah, Muhammad A Usmani, David H Steel, John A Sayer, Ashok K Narsani, Robert B Hufnagel, Saima Riazuddin and 3 more

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. A Novel HeterozygousInternational journal of molecular sciences · 2026
    Article
  2. Measuring differences in the ERG in myopia using the RETeval device with skin electrodes.Ophthalmic & physiological optics : the journal of the British College of Ophthalmic Opticians (Optometrists) · 2025
    Article
  3. Article
  4. Article
  5. RABL2 promotes the outward transition zone passage of signaling proteins in cilia via ARL3.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Unraveling the intricate cargo-BBSome coupling mechanism at the ciliary tip.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. A NovelFrontiers in cell and developmental biology · 2021
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 3 countries.

Shakeel A SheikhDepartment of Otorhinolaryngology-Head and Neck Surgery, School of Medicine University of Maryland, Baltimore, Maryland, United States.
Robert A SiskAbrahamson Pediatric Eye Institute, Cincinnati Children's Hospital, Cincinnati, Ohio, United States.
Cara R SchiavonDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, United States.
Yar M WaryahMolecular Biology & Genetics Department, Liaquat University of Medical & Health Sciences, Jamshoro, Pakistan.
Muhammad A UsmaniDepartment of Otorhinolaryngology-Head and Neck Surgery, School of Medicine University of Maryland, Baltimore, Maryland, United States.
David H SteelInstitute of Genetic Medicine, Newcastle University, International Centre for Life, Newcastle upon Tyne, United Kingdom.
John A SayerInstitute of Genetic Medicine, Newcastle University, International Centre for Life, Newcastle upon Tyne, United Kingdom.
Ashok K NarsaniInstitute of Ophthalmology, Liaquat University of Medical & Health Sciences, Jamshoro, Pakistan.
Robert B HufnagelNational Eye Institute, National Institutes of Health, Bethesda, Maryland, United States.
Saima RiazuddinDepartment of Otorhinolaryngology-Head and Neck Surgery, School of Medicine University of Maryland, Baltimore, Maryland, United States.
Richard A KahnDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia, United States.
Ali M WaryahMolecular Biology & Genetics Department, Liaquat University of Medical & Health Sciences, Jamshoro, Pakistan.
Zubair M AhmedDepartment of Otorhinolaryngology-Head and Neck Surgery, School of Medicine University of Maryland, Baltimore, Maryland, United States.
University of Maryland, Baltimore · USLiaquat University of Medical & Health Sciences · PKEmory University · USCentre for Life · GBCincinnati Eye Institute · USNational Institutes of Health · USNewcastle University · GB

Funding

Molecular mechanisms of ARF family GTPasesR35GM122568 · NIGMS · EMORY UNIVERSITY · PI KAHN, RICHARD A · 2017 to 2024
$3.7M
Molecular Determinants of Usher Syndrome Disorder in HumansR01DC016295 · NIDCD · UNIVERSITY OF MARYLAND BALTIMORE · PI AHMED, ZUBAIR M. · 2018 to 2022
$2.7M
NIDCD NIH HHS R01 DC016295NIGMS NIH HHS R35 GM122568
6 · The paper itself

Abstract

Purpose: Cone rod dystrophy (CRD) is a group of inherited retinopathies characterized by the loss of cone and rod photoreceptor cells, which results in poor vision. This study aims to clinically and genetically characterize the segregating CRD phenotype in two large, consanguineous Pakistani families. Methods: Funduscopy, optical coherence tomography (OCT), electroretinography (ERG), color vision, and visual acuity assessments were performed to evaluate the retinal structure and function of the affected individuals. Exome sequencing was performed to identify the genetic cause of CRD. Furthermore, the mutation's effect was evaluated using purified, bacterially expressed ADP-ribosylation factor-like protein 3 (ARL3) and mammalian cells. Results: Fundus photography and OCT imaging demonstrated features that were consistent with CRD, including bull's eye macular lesions, macular atrophy, and central photoreceptor thinning. ERG analysis demonstrated moderate to severe reduction primarily of photopic responses in all affected individuals, and scotopic responses show reduction in two affected individuals. The exome sequencing revealed a novel homozygous variant (c.296G>T) in ARL3, which is predicted to substitute an evolutionarily conserved arginine with isoleucine within the encoded protein GTP-binding domain (R99I). The functional studies on the bacterial and heterologous mammalian cells revealed that the arginine at position 99 is essential for the stability of ARL3. Conclusions: Our study uncovers an additional CRD gene and assigns the CRD phenotype to a variant of ARL3. The results imply that cargo transportation in photoreceptors as mediated by the ARL3 pathway is essential for cone and rod cell survival and vision in humans.

Indexed as

Genes, RecessivePoint MutationAdolescentADP-Ribosylation FactorsAdultAnimalsChildChlorocebus aethiopsCone-Rod DystrophiesConsanguinityCOS CellsElectroretinographyExome SequencingFemaleGene ExpressionHeLa CellsADP-Ribosylation FactorsARL3 protein, human

Identifiers

PMID31743939
PMCPMC6944245
OpenAlexW2990291648

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.