Evidence map›Paper›PMID 31742718›Full record

ArticleAlcoholism, clinical and experimental research2020

Novel Ethanol-Sensitive Mutants Identified in an F3 Forward Genetic Screen.

Mary E Swartz, Charles Ben Lovely, Neil McCarthy, Tim Kuka, Johann K Eberhart

Open access · hybridAbstract read
In one paragraph

Article in Alcoholism, clinical and experimental research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. The Role of the Hedgehog Pathway in Alcohol-Induced Birth Defects.Advances in experimental medicine and biology · 2026
    Review
  2. Article
  3. foxe1 mutant zebrafish show indications of a hypothyroid phenotype and increased sensitivity to ethanol for craniofacial malformations.Developmental dynamics : an official publication of the American Association of Anatomists · 2025
    Article
  4. Article
  5. Article
  6. Gene-alcohol interactions in birth defects.Current topics in developmental biology · 2023
    Article
  7. Review
  8. Review
  9. Zebrafish models of fetal alcohol spectrum disorders.Genesis (New York, N.Y. : 2000) · 2021
    Review
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Mary E SwartzDepartment of Molecular Biosciences, Waggoner Center for Alcohol and Addiction Research, Austin, Texas.
Charles Ben LovelyDepartment of Molecular Biosciences, Waggoner Center for Alcohol and Addiction Research, Austin, Texas.
Neil McCarthyDepartment of Molecular Biosciences, Waggoner Center for Alcohol and Addiction Research, Austin, Texas.
Tim KukaDepartment of Molecular Biosciences, Waggoner Center for Alcohol and Addiction Research, Austin, Texas.
Johann K EberhartDepartment of Molecular Biosciences, Waggoner Center for Alcohol and Addiction Research, Austin, Texas.ORCID 0000-0001-5258-2477
Addiction Switzerland · CH

Funding

Cross-Cultural Assessment of FASDU24AA014811 · NIAAA · SAN DIEGO STATE UNIVERSITY · PI EDWARD P RILEY · 2003 to 2026
$13.1M
Mechanisms underlying the multifaceted basis of craniofacial dysmorphogenesisR35DE029086 · NIDCR · UNIVERSITY OF TEXAS AT AUSTIN · PI JOHANN K EBERHART · 2019 to 2026
$7.6M
Causes of Variability in Craniofacial DiseaseR01DE020884 · NIDCR · UNIVERSITY OF TEXAS AT AUSTIN · PI EBERHART, JOHANN K · 2010 to 2019
$3.4M
Exploring the Genetics of FASD in Complementary Mouse and Fish ModelsU01AA021651 · NIAAA · UNIV OF NORTH CAROLINA CHAPEL HILL · PI EBERHART, JOHANN K, PARNELL, SCOTT · 2012 to 2021
$3.2M
Genetic Screens in Zebrafish to Identify Gene-Ethanol InteractionsR01AA023426 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI JOHANN K EBERHART · 2015 to 2026
$3.0M
Analysis of an ethanol-sensitive pathway regulating anterior craniofacial developmentR00AA023560 · NIAAA · UNIVERSITY OF LOUISVILLE · PI LOVELY, CHARLES BENJAMIN · 2018 to 2020
$747k
Genetic and epigenetic interactions underlying FASDR21AA024043 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI EBERHART, JOHANN K · 2016 to 2017
$395k
Analysis of an ethanol-sensitive pathway regulating anterior craniofacial developmentK99AA023560 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI LOVELY, CHARLES BENJAMIN · 2015 to 2016
$190k
Ethanol-induced Lower Jaw Loss in Bmp Signaling Pathway MutantsF32AA021320 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI LOVELY, CHARLES BENJAMIN · 2012 to 2014
$163k
The disruption of receptor mediated endocytosis in ethanol teratogenesisF31AA026781 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI KUKA, TIMOTHY PAUL · 2018 to 2020
$106k
Gene/environment interactions underlying Fetal Alcohol Spectrum Disorder.F31AA020731 · NIAAA · UNIVERSITY OF TEXAS AT AUSTIN · PI MCCARTHY, NEIL · 2011 to 2012
$63k
NIAAA NIH HHS F31 AA020731NIAAA NIH HHS F31 AA026781NIAAA NIH HHS F32 AA021320NIAAA NIH HHS K99 AA023560NIAAA NIH HHS R00 AA023560NIAAA NIH HHS R01 AA023426NIAAA NIH HHS R21 AA024043NIAAA NIH HHS U01 AA021651NIAAA NIH HHS U24 AA014811NIDCR NIH HHS R01 DE020884NIDCR NIH HHS R35 DE029086
6 · The paper itself

Abstract

backgroundFetal alcohol spectrum disorders (FASD) collectively refer to all deleterious outcomes due to prenatal alcohol exposures. Alterations to the face are common phenotypes in FASD. While alcohol exposure is the underlying cause of FASD, many variables modify the outcomes of such exposures. Genetic risk is one such variable, yet we still have a limited understanding of the nature of the genetic loci mediating susceptibility to FASD.

methodsWe employed ENU-based random mutagenesis in zebrafish to identify mutations that enhanced the teratogenicity of ethanol (EtOH). F3 embryos obtained from 126 inbred F2 families were exposed to 1% EtOH in the medium (approximately 41 mM tissue levels). Zebrafish stained with Alcian Blue and Alizarin Red were screened for qualitative alterations to the craniofacial skeleton between 4 and 7 days postfertilization (dpf).

resultsIn all, we recovered 6 EtOH-sensitive mutants, 5 from the genetic screen itself and one as a background mutation in one of our wild-type lines. Each mutant has a unique EtOH-induced phenotype relative to the other mutant lines. All but 1 mutation appears to be recessive in nature, and only 1 mutant, au29, has apparent craniofacial defects in the absence of EtOH. To validate the genetic screen, we genetically mapped au29 and found that it carries a mutation in a previously uncharacterized gene, si:dkey-88l16.3.

conclusionsThe phenotypes of these EtOH-sensitive mutants differ from those in previous characterizations of gene-EtOH interactions. Thus, each mutant is likely to provide novel insights into EtOH teratogenesis. Given that most of these mutants only have craniofacial defects in the presence of EtOH and our mapping of au29, it is also likely that many of the mutants will be previously uncharacterized. Collectively, our findings point to the importance of unbiased genetic screens in the identification, and eventual characterization, of risk alleles for FASD.

Indexed as

Disease Models, AnimalAnimalsCraniofacial AbnormalitiesEthanolFemaleFetal Alcohol Spectrum DisordersGenetic Predisposition to DiseaseGenetic TestingMutationPregnancyZebrafishEthanolAlcoholFASDFetal Alcohol Spectrum DisordersGeneticsZebrafish

Identifiers

PMID31742718
PMCPMC6980918
OpenAlexW2990308025

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.