Evidence map›Paper›PMID 31742435›Full record

ArticleThe CRISPR journal2019

Expanding the CRISPR Toolbox with ErCas12a in Zebrafish and Human Cells.

Wesley A Wierson, Brandon W Simone, Zachary WareJoncas, Carla Mann, Jordan M Welker, Bibekananda Kar, Michael J Emch, Iddo Friedberg, William A C Gendron, Michael A Barry and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The CRISPR journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. GlialeLife · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Comparison of CRISPR-MAD7 and CRISPR-Cas9 for Gene Disruptions inJournal of fungi (Basel, Switzerland) · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. A Mad7 System for Genetic Engineering of Filamentous Fungi.Journal of fungi (Basel, Switzerland) · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Wesley A Wierson *Department of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa.
Brandon W Simone *Department of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota.
Zachary WareJoncasDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota.
Carla MannDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa.
Jordan M WelkerDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa.
Bibekananda KarDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota.
Michael J EmchDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota.
Iddo FriedbergDepartment of Veterinary Microbiology and Preventive Medicine, Iowa State University, Ames, Iowa.
William A C GendronDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota.
Michael A BarryDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota.
Karl J ClarkDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota.
Drena L DobbsDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa.
Maura A McGrailDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa.
Stephen C EkkerDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota.
Jeffrey J EssnerDepartment of Genetics, Development and Cell Biology, Iowa State University, Ames, Iowa.
Mayo Clinic · USIowa State University · US

Funding

Systematic Vertebrate Functional GenomicsR01GM063904 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI EKKER, STEPHEN CARL · 2001 to 2025
$10.7M
In vivo model of microglia inflammasome signaling in neuroinflammationR24OD020166 · OD · IOWA STATE UNIVERSITY · PI CLARK, KARL J, EKKER, STEPHEN CARL · 2016 to 2023
$7.1M
Systematic Vertebrate Functional GenomicsR56GM063904 · NIGMS · MAYO CLINIC ROCHESTER · PI EKKER, STEPHEN CARL · 2009 to 2010
$611k
NIGMS NIH HHS R01 GM063904NIGMS NIH HHS R56 GM063904NIH HHS R24 OD020166
6 · The paper itself

Abstract

CRISPR and CRISPR-Cas effector proteins enable the targeting of DNA double-strand breaks to defined loci based on a variable length RNA guide specific to each effector. The guide RNAs are generally similar in size and form, consisting of a ∼20 nucleotide sequence complementary to the DNA target and an RNA secondary structure recognized by the effector. However, the effector proteins vary in protospacer adjacent motif requirements, nuclease activities, and DNA binding kinetics. Recently, ErCas12a, a new member of the Cas12a family, was identified in

Indexed as

AnimalsBase SequenceClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Associated ProteinsCRISPR-Cas SystemsDNAGene EditingGene TargetingGenetic EngineeringGenomeHumansRNARNA, Guide, CRISPR-Cas SystemsZebrafishCRISPR-Associated ProteinsDNARNARNA, Guide, CRISPR-Cas Systems

Identifiers

PMID31742435
PMCPMC6919245
OpenAlexW2990128054

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.