Evidence map›Paper›PMID 31742433›Full record

ArticleThe CRISPR journal2019

An Engineered Cas-Transposon System for Programmable and Site-Directed DNA Transpositions.

Sway P Chen, Harris H Wang

Abstract read
In one paragraph

Article in The CRISPR journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  13. Computational Tools and Resources for CRISPR/Cas Genome Editing.Genomics, proteomics & bioinformatics · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sway P ChenDepartment of Systems Biology, Columbia University Medical Center, New York, New York.
Harris H WangDepartment of Systems Biology, Columbia University Medical Center, New York, New York.
Columbia University Irving Medical Center · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007367 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI REINER, STEVEN L · 1985 to 2021
$25.1M
Functional Metagenomic Reprogramming of the Human Microbiome through Mobilome EngDP5OD009172 · OD · HARVARD MEDICAL SCHOOL · PI WANG, HARRIS H · 2011 to 2015
$2.0M
Novel genetic engineering tools for functional studies of the gut microbiomeF30DK111145 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CHEN, SWAY PENG · 2017 to 2020
$159k
NIDDK NIH HHS F30 DK111145NIGMS NIH HHS T32 GM007367NIH HHS DP5 OD009172
6 · The paper itself

Abstract

Efficient site-directed insertion of heterologous DNA into a genome remains an outstanding challenge. Recombinases that can integrate kilobase-sized DNA constructs are difficult to reprogram to user-defined loci, while genomic insertion using CRISPR-Cas methods relies on inefficient host DNA repair machinery. Here, we describe a Cas-Transposon (CasTn) system for genomic insertions that uses a Himar1 transposase fused to a catalytically dead dCas9 nuclease to mediate programmable, site-directed transposition. Using cell-free

Indexed as

CRISPR-Associated Protein 9CRISPR-Cas SystemsDNA Transposable ElementsEndonucleasesEscherichia coliGene EditingMutagenesis, InsertionalRecombination, GeneticTransposasesCRISPR-Associated Protein 9DNA Transposable ElementsEndonucleasesTransposases

Identifiers

PMID31742433
PMCPMC6919251
OpenAlexW2996064887

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.