Evidence map›Paper›PMID 31741771›Full record

ArticleOncoimmunology

Organotypic tumor slice cultures provide a versatile platform for immuno-oncology and drug discovery.

Ramya Sivakumar, Marina Chan, Jiye Stella Shin, Nao Nishida-Aoki, Heidi L Kenerson, Olivier Elemento, Himisha Beltran, Raymond Yeung, Taranjit S Gujral

Abstract read
In one paragraph

Article in Oncoimmunology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 69 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
69citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

69 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  9. Review
  10. DR5 CAR-T cells target melanoma and suppress MDSCs with minimal toxicity.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  11. A systems approach identifies MERTK as a therapeutic vulnerability in ZFTA-RELA-driven ependymomas.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  12. A Pan-Cancer Ex Vivo Drug Screen Atlas for Functional Precision Oncology.bioRxiv : the preprint server for biology · 2026
    Article
  13. Observational
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9 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ramya SivakumarDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Marina ChanDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Jiye Stella ShinDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Nao Nishida-AokiDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Heidi L KenersonDepartment of Surgery, University of Was hington, Seattle, WA, USA.
Olivier ElementoEnglander Institute of Precision medicine, Weill Cornell Medicine, NY, USA.
Himisha BeltranDepartment of Medical Oncology, Dana Farber Cancer Institute, Harvard Medical School, Boston, MA, USA.
Raymond YeungDepartment of Surgery, University of Was hington, Seattle, WA, USA.
Taranjit S GujralDivision of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.ORCID 0000-0002-4453-3031

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Frizzled2 Signaling in Metastatic CancersK22CA201229 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GUJRAL, TARAN SINGH · 2016 to 2018
$562k
NCI NIH HHS K22 CA201229NCI NIH HHS P30 CA015704
6 · The paper itself

Abstract

Organotypic tumor slices represent a physiologically-relevant culture system for studying the tumor microenvironment. Systematic characterization of the tumor slice culture system will enable its effective application for translational research. Here, using flow cytometry-based immunophenotyping, we performed a comprehensive characterization of the immune cell composition in organotypic tumor slices prepared from four syngeneic mouse tumor models and a human liver tumor. We found that the immune cell compositions of organotypic tumor slices prepared on the same day as the tumor cores were harvested are similar. Differences were primarily observed in the lymphocyte population of a clinical hepatocellular carcinoma case. Viable populations of immune cells persisted in the tumor slices for 7 days. Despite some changes in the immune cell populations, we showed the utility of mouse tumor slices for assessing responses to immune-modulatory agents. Further, we demonstrated the ability to use patient-derived xenograft tumor slices for assessing responses to targeted and cytotoxic drugs. Overall, tumor slices provide a broadly useful platform for studying the tumor microenvironment and evaluating the preclinical efficacy of cancer therapeutics.

Indexed as

cancerex vivo modelsimmuno-oncologysyngeneic modelTumor slices

Identifiers

PMID31741771
PMCPMC6844320

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.