Evidence map›Paper›PMID 31741104›Full record

ArticleGenetica2019

Genome-wide identification, phylogenetic and expression analysis of the maize HECT E3 ubiquitin ligase genes.

Yunfeng Li, Lihong Zhai, Jingsheng Fan, Jiaxin Ren, Wenrong Gong, Xin Wang, Jun Huang

Abstract read
PubMed Publisher
In one paragraph

Article in Genetica, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Genome-Wide Analysis of HECT E3 Ligases Members inInternational journal of molecular sciences · 2024
    Article
  3. Review
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yunfeng LiGuangdong Provincial Key Laboratory of Plant Molecular Breeding, South China Agricultural University, Guangzhou, 510642, China.
Lihong ZhaiMedical College, Hubei University of Arts and Science, Xiangyang, 441053, China.
Jingsheng FanGuangdong Provincial Key Laboratory of Plant Molecular Breeding, South China Agricultural University, Guangzhou, 510642, China.
Jiaxin RenMedical College, Hubei University of Arts and Science, Xiangyang, 441053, China.
Wenrong GongMedical College, Hubei University of Arts and Science, Xiangyang, 441053, China.
Xin WangGuangdong Provincial Key Laboratory of Plant Molecular Breeding, South China Agricultural University, Guangzhou, 510642, China.
Jun HuangGuangdong Provincial Key Laboratory of Plant Molecular Breeding, South China Agricultural University, Guangzhou, 510642, China. junhuang@scau.edu.cn.ORCID http://orcid.org/0000-0002-6092-4366
South China Agricultural University · CNHubei University of Arts and Science · CN

Funding

Keypoint Research and Invention Program of Guangdong Province 2018B020202013National Key Research and Development Program of China 2018YFD0100106Natural Science Foundation of Guangdong Province of China 2018A030313865
6 · The paper itself

Abstract

HECT (homologous to the E6AP carboxyl terminus) ubiquitin ligase genes (E3s) are enzymes with diverse functions influencing plant growth, development, and responses to abiotic stresses. However, there is relatively little information available regarding the maize HECT E3 gene family. In the present study, 12 maize HECT E3 genes (ZmUPL1 to ZmUPL12) were identified at the whole-genome level. The phylogenetic relationships, structures, and expression levels of the maize HECT E3 genes were then analyzed. On the basis of the constructed maximum likelihood phylogenetic tree, the HECT E3 genes were divided into six groups. The quantitative real-time polymerase chain reaction assay results revealed that all of the maize ZmUPL genes were expressed in most of the examined tissues and were responsive to three abiotic stresses. Considered together, the study results may provide a useful foundation for future investigations of maize stress-tolerance genes as well as functional analyses of the E3 enzymes in diverse agriculturally important crop species.

Indexed as

PhylogenyPlant ProteinsStress, PhysiologicalUbiquitin-Protein LigasesZea maysPlant ProteinsUbiquitin-Protein LigasesGene expressionHECT E3 ubiquitin ligaseZea mays L.ZmUPL

Identifiers

PMID31741104
OpenAlexW2988463797

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.