Evidence map›Paper›PMID 31740929›Full record

ArticleJournal of experimental botany2020

Comparative proteome and metabolome analyses of latex-exuding and non-exuding Taraxacum koksaghyz roots provide insights into laticifer biology.

Vincent Alexander Benninghaus, Nicole van Deenen, Boje Müller, Kai-Uwe Roelfs, Ines Lassowskat, Iris Finkemeier, Dirk Prüfer, Christian Schulze Gronover

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Comparative Transcriptome Analysis inFrontiers in genetics · 2021
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Vincent Alexander BenninghausFraunhofer Institute for Molecular Biology and Applied Ecology, IME, Muenster, Germany.
Nicole van DeenenInstitute of Plant Biology and Biotechnology, University of Muenster, Muenster, Germany.
Boje MüllerFraunhofer Institute for Molecular Biology and Applied Ecology, IME, Muenster, Germany.
Kai-Uwe RoelfsFraunhofer Institute for Molecular Biology and Applied Ecology, IME, Muenster, Germany.
Ines LassowskatInstitute of Plant Biology and Biotechnology, University of Muenster, Muenster, Germany.
Iris FinkemeierInstitute of Plant Biology and Biotechnology, University of Muenster, Muenster, Germany.
Dirk PrüferFraunhofer Institute for Molecular Biology and Applied Ecology, IME, Muenster, Germany.
Christian Schulze GronoverFraunhofer Institute for Molecular Biology and Applied Ecology, IME, Muenster, Germany.
Fraunhofer Institute for Molecular Biology and Applied Ecology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Taraxacum koksaghyz has been identified as one of the most promising alternative rubber crops. Its high-quality rubber is produced in the latex of laticifers, a specialized cell type that is organized in a network of elongated tubules throughout the entire plant body. In order to gain insights into the physiological role(s) of latex and hence laticifer biology, we examine the effects of barnase-induced latex RNA degradation on the metabolite and protein compositions in the roots. We established high-quality datasets that enabled precise discrimination between cellular and physiological processes in laticifers and non-laticifer cell types of roots at different vegetative stages. We identified numerous latex-specific proteins, including a perilipin-like protein that has not been studied in plants yet. The barnase-expressing plants revealed a phenotype that did not exude latex, which may provide a valuable genetic basis for future studies of plant-environment interactions concerning latex and also help to clarify the evolution and arbitrary distribution of latex throughout the plant kingdom. The overview of temporal changes in composition and protein abundance provided by our data opens the way for a deeper understanding of the molecular interactions, reactions, and network relationships that underlie the different metabolic pathways in the roots of this potential rubber crop.

Indexed as

LatexTaraxacumBiologyMetabolomeProteomeLatexProteomeArticulated laticifersbarnase/barstardifferentially accumulated proteinslatex-non-exuding phenotypemetabolomicsproteomicsTaraxacum koksaghyz

Identifiers

PMID31740929
PMCPMC7031084
OpenAlexW2990675360

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.