Evidence map›Paper›PMID 31740720›Full record

ArticleScientific reports2019

Elemental Zn and its Binding Protein Zinc-α2-Glycoprotein are Elevated in HPV-Positive Oropharyngeal Squamous Cell Carcinoma.

Kate Poropatich, Tatjana Paunesku, Alia Zander, Brian Wray, Matthew Schipma, Prarthana Dalal, Mark Agulnik, Si Chen, Barry Lai, Olga Antipova and 8 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 1 country.

Kate PoropatichDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, IL, 60611, USA. kate.poropatich@northwestern.edu.
Tatjana PauneskuDepartment of Radiation Oncology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-8698-2938
Alia ZanderDepartment of Radiation Oncology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Brian WrayCenter for Genetic Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Matthew SchipmaCenter for Genetic Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Prarthana DalalDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, IL, 60611, USA.
Mark AgulnikRobert H Lurie Comprehensive Cancer Center, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Si ChenX-ray Science Division, Advanced Photon Source, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL, 60439, USA.
Barry LaiX-ray Science Division, Advanced Photon Source, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL, 60439, USA.
Olga AntipovaX-ray Science Division, Advanced Photon Source, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL, 60439, USA.
Evan MaxeyX-ray Science Division, Advanced Photon Source, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL, 60439, USA.
Koshonna BrownDepartment of Radiation Oncology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Michael Beau WanzerDepartment of Radiation Oncology, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Demirkan GurselNorthwestern University Pathology Core Facility, Robert H Lurie Comprehensive Cancer Center, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Hanli FanNorthwestern University Pathology Core Facility, Robert H Lurie Comprehensive Cancer Center, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Alfred RademakerDepartment of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Gayle E WoloschakRobert H Lurie Comprehensive Cancer Center, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Bharat B MittalRobert H Lurie Comprehensive Cancer Center, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Northwestern University · USArgonne National Laboratory · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1993 to 2026
$153.9M
TR&D 7: Cell Specific ProteomicsP41GM108569 · NIGMS · NORTHWESTERN UNIVERSITY · PI KELLEHER, NEIL L · 2015 to 2024
$13.6M
Defining the Role of IQGAP1 in Leukocyte Transmigration in vitro and in vivoF30HL134202 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DALAL, PRARTHANA · 2016 to 2020
$220k
NCI NIH HHS P30 CA060553NHLBI NIH HHS F30 HL134202NIGMS NIH HHS P41 GM108569
6 · The paper itself

Abstract

Human papillomavirus (HPV)-positive head and neck squamous cell carcinoma (HNSCC) is biologically distinct from HPV-negative HNSCC. Outside of HPV-status, few tumor-intrinsic variables have been identified that correlate to improved survival. As part of exploratory analysis into the trace elemental composition of oropharyngeal squamous cell carcinoma (OPSCC), we performed elemental quanitification by X-ray fluorescence microscopy (XFM) on a small cohort (n = 32) of patients with HPV-positive and -negative OPSCC and identified in HPV-positive cases increased zinc (Zn) concentrations in tumor tissue relative to normal tissue. Subsequent immunohistochemistry of six Zn-binding proteins-zinc-α2-glycoprotein (AZGP1), Lipocalin-1, Albumin, S100A7, S100A8 and S100A9-revealed that only AZGP1 expression significantly correlated to HPV-status (p < 0.001) and was also increased in tumor relative to normal tissue from HPV-positive OPSCC tumor samples. AZGP1 protein expression in our cohort significantly correlated to a prolonged recurrence-free survival (p = 0.029), similar to HNSCC cases from the TCGA (n = 499), where highest AZGP1 mRNA levels correlated to improved overall survival (p = 0.023). By showing for the first time that HPV-positive OPSCC patients have increased intratumoral Zn levels and AZGP1 expression, we identify possible positive prognostic biomarkers in HNSCC as well as possible mechanisms of increased sensitivity to chemoradiation in HPV-positive OPSCC.

Indexed as

Calgranulin ACalgranulin BFemaleHumansLipocalin 1MaleMiddle AgedOropharyngeal NeoplasmsPapillomavirus InfectionsS100 Calcium Binding Protein A7Seminal Plasma ProteinsSpectrometry, X-Ray EmissionSquamous Cell Carcinoma of Head and NeckZincZn-Alpha-2-GlycoproteinCalgranulin ACalgranulin BLipocalin 1S100A7 protein, humanS100A8 protein, humanS100A9 protein, humanS100 Calcium Binding Protein A7Seminal Plasma ProteinsZincZn-Alpha-2-Glycoprotein

Identifiers

PMID31740720
PMCPMC6861298
OpenAlexW2982852340

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.