Evidence map›Paper›PMID 31739820›Full record

ArticleInternational psychogeriatrics2020

Sleep-wake disorders in Alzheimer's disease: further genetic analyses in relation to objective sleep measures.

Jerome A Yesavage, Art Noda, Alesha Heath, M Windy McNerney, Benjamin W Domingue, Yozen Hernandez, Gary Benson, Joachim Hallmayer, Ruth O'Hara, Leanne M Williams and 3 more

Open access · diamondAbstract read
PubMed Publisher
In one paragraph

Article in International psychogeriatrics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Jerome A YesavageDepartment of Veterans Affairs, Sierra-Pacific MIRECC, Palo Alto, CA, USA.
Art NodaDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, CA, USA.
Alesha HeathDepartment of Veterans Affairs, Sierra-Pacific MIRECC, Palo Alto, CA, USA.
M Windy McNerneyDepartment of Veterans Affairs, Sierra-Pacific MIRECC, Palo Alto, CA, USA.
Benjamin W DomingueGraduate School of Education, Stanford University, Stanford, CA, USA.
Yozen HernandezGraduate Program in Bioinformatics, Laboratory for Biocomputing and Informatics, Department of Computer Science, Boston University, Boston, MA, USA.
Gary BensonGraduate Program in Bioinformatics, Laboratory for Biocomputing and Informatics, Department of Computer Science, Boston University, Boston, MA, USA.
Joachim HallmayerDepartment of Veterans Affairs, Sierra-Pacific MIRECC, Palo Alto, CA, USA.
Ruth O'HaraDepartment of Veterans Affairs, Sierra-Pacific MIRECC, Palo Alto, CA, USA.
Leanne M WilliamsDepartment of Veterans Affairs, Sierra-Pacific MIRECC, Palo Alto, CA, USA.
Andrea N Goldstein-PiekarskiDepartment of Veterans Affairs, Sierra-Pacific MIRECC, Palo Alto, CA, USA.
Jamie M ZeitzerDepartment of Veterans Affairs, Sierra-Pacific MIRECC, Palo Alto, CA, USA.
J Kaci FairchildDepartment of Veterans Affairs, Sierra-Pacific MIRECC, Palo Alto, CA, USA.
Stanford University · USPalo Alto Veterans Institute for Research · USBoston University · USMental Illness Research, Education and Clinical Centers · US

Funding

Stanford Medicine Center for Longevity and Healthy Aging Research Education CoreP30AG059307 · NIA · STANFORD UNIVERSITY · PI ZOU, JAMES · 2018 to 2025
$4.9M
Computational appliance: a supercomputer for modern biomedical researchS10OD023452 · OD · STANFORD UNIVERSITY · PI DATTA, SOMALEE · 2017 to 2017
$600k
NIA NIH HHS P30 AG059307
6 · The paper itself

Abstract

This paper presents updated analyses on the genetic associations of sleep disruption in individuals with Alzheimer's disease (AD). We published previously a study of the association between single nucleotide polymorphisms (SNPs) found in eight genes related to circadian rhythms and objective measures of sleep-wake disturbances in 124 individuals with AD. Here, we present new relevant analyses using polygenic risk scores (PRS) and variable number tandem repeats (VNTRs) enumerations. PRS were calculated using the genetic data from the original participants and relevant genome wide association studies (GWAS). VNTRs for the same circadian rhythm genes studied with SNPs were obtained from a separate cohort of participants using whole genome sequencing (WGS). Objectively (wrist actigraphy) determined wake after sleep onset (WASO) was used as a measure of sleep disruption. None of the PRS were associated with sleep disturbance. Computer analyses using VNTRseek software generated a total of 30 VNTRs for the circadian-related genes but none appear relevant to our objective sleep measure. In addition, of 71 neurotransmitter function-related genes, 29 genes had VNTRs that differed from the reference VNTR, but it was not clear if any of these might affect circadian function in AD patients. Although we have not found in either the current analyses or in our previous published analyses of SNPs any direct linkages between identified genetic factors and WASO, research in this area remains in its infancy.

Indexed as

ActigraphyAgedAged, 80 and overAlzheimer DiseaseCircadian RhythmFemaleGenome-Wide Association StudyHumansMaleMiddle AgedPolymorphism, Single NucleotideSleepSleep Wake DisordersTandem Repeat SequencesAlzheimer’s diseasecircadian rhythmgeneticspolygenic risk scores and variable number tandem repeatsleepwake after sleep onset

Identifiers

PMID31739820
OpenAlexW2990025154

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.