Evidence map›Paper›PMID 31739777›Full record

ArticleMicrobial cell factories2019

Synthetic control devices for gene regulation in Penicillium chrysogenum.

László Mózsik, Zsófia Büttel, Roel A L Bovenberg, Arnold J M Driessen, Yvonne Nygård

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Establishment of the Genetic Transformation System ofJournal of fungi (Basel, Switzerland) · 2026
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  5. Review
  6. Article
  7. Tracking the infection dynamics ofFrontiers in plant science · 2025
    Article
  8. Heterologous Naringenin Production in the Filamentous FungusJournal of agricultural and food chemistry · 2023
    Article
  9. CRISPR/Cas9-Mediated Disruption of theJournal of fungi (Basel, Switzerland) · 2023
    Article
  10. Microorganisms · 2022
    Review
  11. Transcriptional Activation of Biosynthetic Gene Clusters in Filamentous Fungi.Frontiers in bioengineering and biotechnology · 2022
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

László MózsikMolecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands.ORCID http://orcid.org/0000-0001-5211-3873
Zsófia BüttelMolecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands.
Roel A L BovenbergDSM Biotechnology Center, Alexander Fleminglaan 1, 2613 AX, Delft, The Netherlands.
Arnold J M DriessenMolecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands.
Yvonne NygårdMolecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands. yvonne.nygard@chalmers.se.ORCID http://orcid.org/0000-0001-6117-0343
University of Groningen · NLDSM (Netherlands) · NL

Funding

FP7 People: Marie-Curie Actions 607332H2020 Marie Skłodowska-Curie Actions 713482
6 · The paper itself

Abstract

backgroundOrthogonal, synthetic control devices were developed for Penicillium chrysogenum, a model filamentous fungus and industrially relevant cell factory. In the synthetic transcription factor, the QF DNA-binding domain of the transcription factor of the quinic acid gene cluster of Neurospora crassa is fused to the VP16 activation domain. This synthetic transcription factor controls the expression of genes under a synthetic promoter containing quinic acid upstream activating sequence (QUAS) elements, where it binds. A gene cluster may demand an expression tuned individually for each gene, which is a great advantage provided by this system.

resultsThe control devices were characterized with respect to three of their main components: expression of the synthetic transcription factors, upstream activating sequences, and the affinity of the DNA binding domain of the transcription factor to the upstream activating domain. This resulted in synthetic expression devices, with an expression ranging from hardly detectable to a level similar to that of highest expressed native genes. The versatility of the control device was demonstrated by fluorescent reporters and its application was confirmed by synthetically controlling the production of penicillin.

conclusionsThe characterization of the control devices in microbioreactors, proved to give excellent indications for how the devices function in production strains and conditions. We anticipate that these well-characterized and robustly performing control devices can be widely applied for the production of secondary metabolites and other compounds in filamentous fungi.

Indexed as

Gene Expression Regulation, FungalBiosynthetic PathwaysFungal ProteinsGenes, FungalModels, MolecularNeurospora crassaOrganisms, Genetically ModifiedPenicillium chrysogenumTranscription FactorsTransgenesFungal ProteinsTranscription FactorsGene regulationHybrid transcription factorPenicillium chrysogenumSecondary metabolite productionSynthetic expression systemSynthetic gene cluster

Identifiers

PMID31739777
PMCPMC6859608
OpenAlexW2989834031

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.