Evidence map›Paper›PMID 31733643›Full record

ArticleBMC pediatrics2019

The prevalence and clinical characteristics of pertussis-associated pneumonia among infants in Botswana.

Bahaa Abu-Raya, David M Goldfarb, Marek Smieja, Kathy Luinstra, Melissa Richard-Greenblatt, Andrew P Steenhoff, Kristen A Feemster, Tonya Arscott-Mills, Coleen K Cunningham, Samir S Shah and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC pediatrics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 3 countries.

Bahaa Abu-RayaVaccine Evaluation Center, BC Children's Hospital Research Institute, University of British Columbia, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada. baburaya@bcchr.ubc.ca.ORCID 0000-0002-3528-0343
David M GoldfarbDivision of Infectious Diseases, Department of Pediatrics, University of British Columbia, Vancouver, BC, Canada.
Marek SmiejaDepartment of Pathology and Molecular Medicine, McMaster University, Hamilton, Ontario, Canada.
Kathy LuinstraDepartment of Pathology and Molecular Medicine, McMaster University, Hamilton, Ontario, Canada.
Melissa Richard-GreenblattDepartment of Pathology and Molecular Medicine, McMaster University, Hamilton, Ontario, Canada.
Andrew P SteenhoffBotswana-University of Pennsylvania Partnership, Gaborone, Botswana.
Kristen A FeemsterDivision of Infectious Diseases, Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Tonya Arscott-MillsBotswana-University of Pennsylvania Partnership, Gaborone, Botswana.
Coleen K CunninghamDivision of Pediatric Infectious Diseases, Duke University Medical Center, Durham, NC, USA.
Samir S ShahDivisions of Hospital Medicine and Infectious Diseases, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Mohamed Zaakir PatelDepartment of Paediatrics and Adolescent Health, University of Botswana School of Medicine, Gaborone, Botswana.
Matthew S KellyBotswana-University of Pennsylvania Partnership, Gaborone, Botswana.
Manish SadaranganiVaccine Evaluation Center, BC Children's Hospital Research Institute, University of British Columbia, 950 West 28th Avenue, Vancouver, BC, V5Z 4H4, Canada.
Children's Hospital of Philadelphia · USMcMaster University · CAUniversity of British Columbia · CACincinnati Children's Hospital Medical Center · USDuke Medical Center · USUniversity of Botswana · BWUniversity of British Columbia Hospital · CA

Funding

Virus & Reservoirs CoreP30AI045008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI DAVID S METZGER · 1999 to 2026
$78.6M
Social and Behavioral Sciences CoreP30AI064518 · NIAID · DUKE UNIVERSITY · PI GEORGIA Doris TOMARAS · 2005 to 2026
$50.5M
Nasopharyngeal Microbiome and Risk of Bacterial Pathogen Colonization in InfantsK23AI135090 · NIAID · DUKE UNIVERSITY · PI KELLY, MATTHEW SCOTT · 2018 to 2022
$860k
NIAID NIH HHS K23 AI135090NIAID NIH HHS P30 AI045008NIAID NIH HHS P30 AI064518
6 · The paper itself

Abstract

backgroundThere are scant data on the prevalence and clinical course of pertussis disease among infants with pneumonia in low- and middle-income countries. While pertussis vaccination coverage is high (≥90%) among infants in Botswana, human immunodeficiency virus (HIV) infection affects nearly one-third of pregnancies. We aimed to evaluate the prevalence and clinical course of pertussis disease in a cohort of HIV-unexposed uninfected (HUU), HIV-exposed uninfected (HEU), and HIV-infected infants with pneumonia in Botswana.

methodsWe recruited children 1-23 months of age with clinical pneumonia at a tertiary care hospital in Gaborone, Botswana between April 2012 and June 2016. We obtained nasopharyngeal swab specimens at enrollment and tested these samples using a previously validated in-house real-time PCR assay that detects a unique sequence of the porin gene of Bordetella pertussis.

resultsB. pertussis was identified in 1/248 (0.4%) HUU, 3/110 (2.7%) HEU, and 0/33 (0.0%) HIV-infected children. All pertussis-associated pneumonia cases occurred in infants 1-5 months of age (prevalence, 1.0% [1/103] in HUU and 4.8% [3/62] in HEU infants). No HEU infants with pertussis-associated pneumonia were taking cotrimoxazole prophylaxis at the time of hospital presentation. One HUU infant with pertussis-associated pneumonia required intensive care unit admission for mechanical ventilation, but there were no deaths.

conclusionsThe prevalence of pertussis was low among infants and young children with pneumonia in Botswana. Although vaccination against pertussis in pregnancy is designed to prevent classical pertussis disease, reduction of pertussis-associated pneumonia might be an important additional benefit.

Indexed as

BotswanaCohort StudiesFemaleHumansInfantMalePneumonia, BacterialPrevalenceProspective StudiesWhooping CoughBordetella pertussisHIV-exposed uninfectedPneumonia

Identifiers

PMID31733643
PMCPMC6858628
OpenAlexW2983304941

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.