Evidence map›Paper›PMID 31733517›Full record

ArticleiScience2019

Single-Cell RNA-seq Reveals Profound Alterations in Mechanosensitive Dorsal Root Ganglion Neurons with Vitamin E Deficiency.

Carrie J Finno, Janel Peterson, Mincheol Kang, Seojin Park, Matthew H Bordbari, Blythe Durbin-Johnson, Matthew Settles, Maria C Perez-Flores, Jeong H Lee, Ebenezer N Yamoah

Open access · goldAbstract read
In one paragraph

Article in iScience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
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  5. A versatile functional interaction between electrically silent KCellular and molecular life sciences : CMLS · 2024
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  9. Cisplatin Neurotoxicity Targets Specific Subpopulations and KFrontiers in cellular neuroscience · 2022
    Article
  10. Review
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  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Carrie J FinnoDepartment of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, CA 95616, USA. Electronic address: cjfinno@ucdavis.edu.
Janel PetersonDepartment of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, CA 95616, USA.
Mincheol KangDepartment of Physiology, School of Medicine, University of Nevada, Reno, Reno, NV 89557, USA.
Seojin ParkDepartment of Physiology, School of Medicine, University of Nevada, Reno, Reno, NV 89557, USA.
Matthew H BordbariDepartment of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, CA 95616, USA.
Blythe Durbin-JohnsonBioinformatics Core Facility, Genome Center, University of California, Davis, CA 95616, USA.
Matthew SettlesBioinformatics Core Facility, Genome Center, University of California, Davis, CA 95616, USA.
Maria C Perez-FloresDepartment of Physiology, School of Medicine, University of Nevada, Reno, Reno, NV 89557, USA.
Jeong H LeeDepartment of Physiology, School of Medicine, University of Nevada, Reno, Reno, NV 89557, USA.
Ebenezer N YamoahDepartment of Physiology, School of Medicine, University of Nevada, Reno, Reno, NV 89557, USA.
University of California, Davis · USUniversity of Nevada, Reno · US

Funding

Structural Analyses CoreP01AG051443 · NIA · UNIVERSITY OF NEVADA RENO · PI YAMOAH, EBENEZER N · 2016 to 2025
$15.5M
Inner ear ion channels in healthy and diseased conditionsR01DC016099 · NIDCD · UNIVERSITY OF NEVADA RENO · PI EBENEZER N YAMOAH · 2017 to 2026
$4.7M
Mechanisms of Growth Factor Responsiveness in the Aging Auditory SystemR01AG060504 · NIA · UNIVERSITY OF NEVADA RENO · PI FRITZSCH, BERND, YAMOAH, EBENEZER N · 2018 to 2022
$2.5M
Calcium-dependent functions in Hair Cells and Spiral Ganglion NeuronsR01DC015135 · NIDCD · UNIVERSITY OF NEVADA RENO · PI GRATTON, MICHAEL ANNE NMI, YAMOAH, EBENEZER N · 2016 to 2020
$2.1M
Molecular pathogenesis of alpha-tocopherol associated neuroaxonal dystrophy in anK01OD015134 · OD · UNIVERSITY OF MINNESOTA · PI FINNO, CARRIE · 2013 to 2017
$599k
NCATS NIH HHS L40 TR001136NIA NIH HHS P01 AG051443NIA NIH HHS R01 AG060504NIDCD NIH HHS R01 DC015135NIDCD NIH HHS R01 DC016099NIH HHS K01 OD015134
6 · The paper itself

Abstract

Ninety percent of Americans consume less than the estimated average requirements of dietary vitamin E (vitE). Severe vitE deficiency due to genetic mutations in the tocopherol transfer protein (TTPA) in humans results in ataxia with vitE deficiency (AVED), with proprioceptive deficits and somatosensory degeneration arising from dorsal root ganglia neurons (DRGNs). Single-cell RNA-sequencing of DRGNs was performed in Ttpa

Indexed as

Molecular NeuroscienceNeuroscienceTranscriptomics

Identifiers

PMID31733517
PMCPMC6864320
OpenAlexW2984196690

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.