Evidence map›Paper›PMID 31732672›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

The retrograde signaling protein GUN1 regulates tetrapyrrole biosynthesis.

Takayuki Shimizu, Sylwia M Kacprzak, Nobuyoshi Mochizuki, Akira Nagatani, Satoru Watanabe, Tomohiro Shimada, Kan Tanaka, Yuuki Hayashi, Munehito Arai, Dario Leister and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 64 citations in OpenAlex.

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  14. QTL mapping and candidate gene analysis reveal two major loci regulating green leaf color in non-heading Chinese cabbage.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Takayuki ShimizuGraduate School of Arts and Sciences, The University of Tokyo, Komaba, Meguro-ku, 153-8902 Tokyo, Japan.
Sylwia M KacprzakSchool of Biological Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom.
Nobuyoshi MochizukiGraduate School of Science, Kyoto University, Sakyo-ku, 606-8502 Kyoto, Japan.
Akira NagataniGraduate School of Science, Kyoto University, Sakyo-ku, 606-8502 Kyoto, Japan.
Satoru WatanabeDepartment of Bioscience, Tokyo University of Agriculture, Setagaya-ku, 156-8502 Tokyo, Japan.
Tomohiro ShimadaLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan.ORCID 0000-0002-8361-0730
Kan TanakaLaboratory for Chemistry and Life Science, Institute of Innovative Research, Tokyo Institute of Technology, Yokohama 226-8503, Japan.
Yuuki HayashiGraduate School of Arts and Sciences, The University of Tokyo, Komaba, Meguro-ku, 153-8902 Tokyo, Japan.
Munehito AraiGraduate School of Arts and Sciences, The University of Tokyo, Komaba, Meguro-ku, 153-8902 Tokyo, Japan.ORCID 0000-0002-1223-2242
Dario LeisterPlant Molecular Biology, Faculty of Biology, Ludwig Maximilians Universität München, D-82152 Planegg-Martinsried, Germany.ORCID 0000-0003-1897-8421
Haruko OkamotoSchool of Biological Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom.
Matthew J TerrySchool of Biological Sciences, University of Southampton, Southampton SO17 1BJ, United Kingdom.ORCID 0000-0001-5002-2708
Tatsuru MasudaGraduate School of Arts and Sciences, The University of Tokyo, Komaba, Meguro-ku, 153-8902 Tokyo, Japan; ctmasuda@fye.c.u-tokyo.ac.jp.ORCID 0000-0002-1585-5832
The University of Tokyo · JPUniversity of Southampton · GBKyoto University · JPTokyo Institute of Technology · JPLudwig-Maximilians-Universität München · DETokyo University of Agriculture · JP

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

The biogenesis of the photosynthetic apparatus in developing seedlings requires the assembly of proteins encoded on both nuclear and chloroplast genomes. To coordinate this process there needs to be communication between these organelles, but the retrograde signals by which the chloroplast communicates with the nucleus at this time are still essentially unknown. The

Indexed as

ArabidopsisArabidopsis ProteinsBiosynthetic PathwaysCell NucleusChloroplastsDNA-Binding ProteinsFerrochelataseGene Expression Regulation, PlantHemeLight-Harvesting Protein ComplexesMutationPhotosynthesisSignal TransductionTetrapyrrolesArabidopsis ProteinsDNA-Binding ProteinsFC1 protein, ArabidopsisFerrochelataseGUN1 protein, ArabidopsisHemeLight-Harvesting Protein ComplexesTetrapyrroleschloroplastgun mutantshemeretrograde signalingtetrapyrrole

Identifiers

PMID31732672
PMCPMC6900522
OpenAlexW2982768066

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.